Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 KRT19P1-201ENST00000405746 1186 ntBASIC20.26■□□□□ 0.83
TCRBV9S1A1TA0A576 AC097381.1-201ENST00000429019 1296 ntBASIC20.26■□□□□ 0.83
TCRBV9S1A1TA0A576 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.26■□□□□ 0.83
TCRBV9S1A1TA0A576 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV9S1A1TA0A576 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.26■□□□□ 0.83
TCRBV9S1A1TA0A576 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.26■□□□□ 0.83
TCRBV9S1A1TA0A576 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.26■□□□□ 0.83
TCRBV9S1A1TA0A576 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.26■□□□□ 0.83
TCRBV9S1A1TA0A576 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV9S1A1TA0A576 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
TCRBV9S1A1TA0A576 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
TCRBV9S1A1TA0A576 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV9S1A1TA0A576 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.26■□□□□ 0.83
TCRBV9S1A1TA0A576 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV9S1A1TA0A576 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBV9S1A1TA0A576 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.25■□□□□ 0.83
TCRBV9S1A1TA0A576 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TCRBV9S1A1TA0A576 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.25■□□□□ 0.83
TCRBV9S1A1TA0A576 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBV9S1A1TA0A576 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.25■□□□□ 0.83
TCRBV9S1A1TA0A576 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBV9S1A1TA0A576 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.25■□□□□ 0.83
TCRBV9S1A1TA0A576 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBV9S1A1TA0A576 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBV9S1A1TA0A576 AC087633.2-202ENST00000565166 1439 ntBASIC20.25■□□□□ 0.83
TCRBV9S1A1TA0A576 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBV9S1A1TA0A576 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBV9S1A1TA0A576 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.24■□□□□ 0.83
TCRBV9S1A1TA0A576 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV9S1A1TA0A576 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.24■□□□□ 0.83
TCRBV9S1A1TA0A576 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.24■□□□□ 0.83
TCRBV9S1A1TA0A576 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV9S1A1TA0A576 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV9S1A1TA0A576 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV9S1A1TA0A576 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.24■□□□□ 0.83
TCRBV9S1A1TA0A576 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV9S1A1TA0A576 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV9S1A1TA0A576 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV9S1A1TA0A576 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV9S1A1TA0A576 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV9S1A1TA0A576 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
TCRBV9S1A1TA0A576 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV9S1A1TA0A576 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV9S1A1TA0A576 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TCRBV9S1A1TA0A576 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
TCRBV9S1A1TA0A576 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV9S1A1TA0A576 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV9S1A1TA0A576 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.24■□□□□ 0.83
TCRBV9S1A1TA0A576 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.24■□□□□ 0.83
TCRBV9S1A1TA0A576 AL356652.1-201ENST00000615962 565 ntBASIC20.24■□□□□ 0.83
TCRBV9S1A1TA0A576 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.24■□□□□ 0.83
TCRBV9S1A1TA0A576 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV9S1A1TA0A576 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.24■□□□□ 0.83
TCRBV9S1A1TA0A576 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV9S1A1TA0A576 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV9S1A1TA0A576 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV9S1A1TA0A576 TREX1-205ENST00000625293 1783 ntBASIC20.23■□□□□ 0.83
TCRBV9S1A1TA0A576 AC018445.3-201ENST00000624177 1945 ntBASIC20.23■□□□□ 0.83
TCRBV9S1A1TA0A576 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV9S1A1TA0A576 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.23■□□□□ 0.83
TCRBV9S1A1TA0A576 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TCRBV9S1A1TA0A576 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV9S1A1TA0A576 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV9S1A1TA0A576 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
TCRBV9S1A1TA0A576 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.23■□□□□ 0.83
TCRBV9S1A1TA0A576 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.23■□□□□ 0.83
TCRBV9S1A1TA0A576 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV9S1A1TA0A576 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TCRBV9S1A1TA0A576 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
TCRBV9S1A1TA0A576 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.23■□□□□ 0.83
TCRBV9S1A1TA0A576 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.23■□□□□ 0.83
TCRBV9S1A1TA0A576 MYCNOS-205ENST00000641950 531 ntBASIC20.23■□□□□ 0.83
TCRBV9S1A1TA0A576 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV9S1A1TA0A576 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV9S1A1TA0A576 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TCRBV9S1A1TA0A576 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV9S1A1TA0A576 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV9S1A1TA0A576 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TCRBV9S1A1TA0A576 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 PGM5P4-201ENST00000421970 445 ntBASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms