Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 KLF2-202ENST00000592003 564 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 MTDHP1-201ENST00000605323 784 ntBASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV10A0A0B4J240 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV10A0A0B4J240 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
TRAV10A0A0B4J240 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV10A0A0B4J240 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV10A0A0B4J240 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV10A0A0B4J240 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV10A0A0B4J240 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TRAV10A0A0B4J240 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV10A0A0B4J240 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TRAV10A0A0B4J240 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV10A0A0B4J240 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV10A0A0B4J240 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV10A0A0B4J240 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV10A0A0B4J240 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV10A0A0B4J240 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV10A0A0B4J240 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV10A0A0B4J240 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV10A0A0B4J240 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV10A0A0B4J240 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV10A0A0B4J240 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAV10A0A0B4J240 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAV10A0A0B4J240 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
TRAV10A0A0B4J240 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV10A0A0B4J240 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV10A0A0B4J240 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV10A0A0B4J240 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV10A0A0B4J240 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV10A0A0B4J240 AL121603.2-201ENST00000557373 2117 ntBASIC14.2□□□□□ -0.14
TRAV10A0A0B4J240 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV10A0A0B4J240 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 HLA-G-202ENST00000376815 851 ntBASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 HLA-G-203ENST00000376818 1127 ntBASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 MAX-217ENST00000557277 728 ntTSL 3 BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 AL023875.1-201ENST00000640777 796 ntBASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TRAV10A0A0B4J240 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms