Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RPS3AP53-201ENST00000454716 778 ntBASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 AC117392.1-201ENST00000487061 596 ntBASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 AC114812.3-201ENST00000509542 730 ntBASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 CCNHP1-201ENST00000513311 678 ntBASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 RNU4-18P-201ENST00000516751 149 ntBASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 AC090193.2-201ENST00000518970 537 ntTSL 4 BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 IGHVII-78-1-201ENST00000521105 269 ntBASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 AP003102.1-201ENST00000525638 661 ntBASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 COPZ1-215ENST00000552362 575 ntTSL 4 BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 AC090287.1-201ENST00000578374 291 ntBASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 AC090699.1-201ENST00000586264 321 ntBASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 VDAC1P5-201ENST00000603132 844 ntBASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 AC015802.5-201ENST00000607478 399 ntBASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 AC027449.1-201ENST00000608890 407 ntBASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 AC016957.2-201ENST00000616998 848 ntBASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 MED15P6-202ENST00000621415 787 ntBASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 CCNT2P1-201ENST00000423082 1315 ntBASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 GPM6B-210ENST00000493677 1372 ntTSL 2 BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 RAB11A-209ENST00000569896 1396 ntTSL 2 BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 AL512283.1-201ENST00000606756 1384 ntBASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 PIWIL3-204ENST00000533313 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 GABRR3-203ENST00000621172 1521 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 ZNF174-203ENST00000571936 1586 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 CHD6-201ENST00000309279 1635 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 XRCC6P5-201ENST00000435236 1795 ntBASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 CCR3-208ENST00000545097 1786 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 AC020978.8-201ENST00000571975 3022 ntBASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 IL24-202ENST00000367093 1819 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 AURKA-201ENST00000312783 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 TRIM5-201ENST00000380027 2290 ntTSL 5 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 DHX8-202ENST00000540306 3809 ntTSL 2 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 MAP3K20-208ENST00000539448 2312 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 AL109811.1-201ENST00000452378 2682 ntTSL 2 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 OR51E1-202ENST00000530215 2942 ntBASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 AC117382.2-201ENST00000564748 3151 ntBASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 FBXO38-201ENST00000296701 3680 ntTSL 2 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 DPM1-201ENST00000371582 1161 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 AL603650.1-201ENST00000412680 240 ntBASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 CTSLP8-201ENST00000413075 967 ntBASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 AL031848.1-201ENST00000419034 351 ntTSL 5 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 YBX1P8-201ENST00000421881 943 ntBASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 AL355516.1-201ENST00000422082 746 ntTSL 3 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 AP000997.1-201ENST00000424313 479 ntTSL 3 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 AC004160.2-201ENST00000425837 563 ntTSL 4 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 AL021939.1-201ENST00000441868 886 ntBASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 AC092447.7-202ENST00000443198 580 ntTSL 2 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 AL136452.1-201ENST00000448495 439 ntBASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 MTND2P25-201ENST00000449028 610 ntBASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 RPSAP52-201ENST00000489520 1144 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 AC098583.2-201ENST00000504151 372 ntBASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 AC091982.1-201ENST00000518134 520 ntBASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 C11orf70-202ENST00000526781 845 ntTSL 3 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 AP000911.4-201ENST00000532272 516 ntTSL 4 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 AC122685.1-202ENST00000556750 555 ntTSL 2 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 ETFRF1-210ENST00000556927 833 ntAPPRIS ALT1 TSL 3 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 CYB5B-205ENST00000561792 823 ntTSL 5 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 EIF4A1P9-201ENST00000576035 1207 ntBASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 RN7SL154P-201ENST00000578043 324 ntBASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 MIR3680-2-201ENST00000578247 87 ntBASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 MIR3680-1-201ENST00000581433 87 ntBASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 AC008626.1-201ENST00000604384 255 ntBASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 AC113554.1-201ENST00000606284 490 ntBASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 AC103974.2-201ENST00000611319 778 ntBASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 AC008833.1-201ENST00000611633 691 ntBASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 AC091046.2-201ENST00000620775 665 ntBASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 AC090772.4-201ENST00000623599 362 ntBASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 MTCO1P1-201ENST00000624263 1081 ntBASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms