Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM39Q9HCM9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
TRIM39Q9HCM9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.97■□□□□ 0.79
TRIM39Q9HCM9 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM39Q9HCM9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.97■□□□□ 0.79
TRIM39Q9HCM9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM39Q9HCM9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.97■□□□□ 0.79
TRIM39Q9HCM9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM39Q9HCM9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.97■□□□□ 0.79
TRIM39Q9HCM9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM39Q9HCM9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TRIM39Q9HCM9 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM39Q9HCM9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.96■□□□□ 0.79
TRIM39Q9HCM9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM39Q9HCM9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM39Q9HCM9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM39Q9HCM9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM39Q9HCM9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM39Q9HCM9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM39Q9HCM9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM39Q9HCM9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM39Q9HCM9 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM39Q9HCM9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM39Q9HCM9 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.96■□□□□ 0.79
TRIM39Q9HCM9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM39Q9HCM9 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM39Q9HCM9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.96■□□□□ 0.79
TRIM39Q9HCM9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM39Q9HCM9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM39Q9HCM9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM39Q9HCM9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM39Q9HCM9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM39Q9HCM9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM39Q9HCM9 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM39Q9HCM9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM39Q9HCM9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM39Q9HCM9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM39Q9HCM9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
TRIM39Q9HCM9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM39Q9HCM9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM39Q9HCM9 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM39Q9HCM9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
TRIM39Q9HCM9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM39Q9HCM9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM39Q9HCM9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM39Q9HCM9 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM39Q9HCM9 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM39Q9HCM9 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM39Q9HCM9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM39Q9HCM9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM39Q9HCM9 UNC93B5-201ENST00000530315 699 ntBASIC19.95■□□□□ 0.78
TRIM39Q9HCM9 PNMA6B-201ENST00000538162 1200 ntBASIC19.95■□□□□ 0.78
TRIM39Q9HCM9 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
TRIM39Q9HCM9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM39Q9HCM9 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM39Q9HCM9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM39Q9HCM9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM39Q9HCM9 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM39Q9HCM9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TRIM39Q9HCM9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM39Q9HCM9 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TRIM39Q9HCM9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TRIM39Q9HCM9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM39Q9HCM9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM39Q9HCM9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM39Q9HCM9 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
TRIM39Q9HCM9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM39Q9HCM9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM39Q9HCM9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
TRIM39Q9HCM9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM39Q9HCM9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM39Q9HCM9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.94■□□□□ 0.78
TRIM39Q9HCM9 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM39Q9HCM9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM39Q9HCM9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.94■□□□□ 0.78
TRIM39Q9HCM9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TRIM39Q9HCM9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM39Q9HCM9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM39Q9HCM9 AC092720.2-201ENST00000602388 1665 ntBASIC19.94■□□□□ 0.78
TRIM39Q9HCM9 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM39Q9HCM9 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM39Q9HCM9 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TRIM39Q9HCM9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM39Q9HCM9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TRIM39Q9HCM9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM39Q9HCM9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM39Q9HCM9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM39Q9HCM9 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM39Q9HCM9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM39Q9HCM9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM39Q9HCM9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM39Q9HCM9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM39Q9HCM9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM39Q9HCM9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM39Q9HCM9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM39Q9HCM9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM39Q9HCM9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM39Q9HCM9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM39Q9HCM9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM39Q9HCM9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms