Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 TMED5-201ENST00000370280 750 ntTSL 2 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 C9orf135-201ENST00000377197 873 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 MIR935-201ENST00000401179 91 ntBASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 Y_RNA.599-201ENST00000410489 109 ntBASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 BMS1P12-201ENST00000428213 706 ntBASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AC114402.2-201ENST00000432760 643 ntBASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AC004870.4-202ENST00000433337 455 ntTSL 3 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 BX664725.1-201ENST00000438252 379 ntBASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 LINC01803-201ENST00000438659 613 ntTSL 2 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 MTND6P32-201ENST00000457611 483 ntBASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 LINC02148-201ENST00000503877 1223 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 NUDT19P5-201ENST00000505620 569 ntBASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 CLDND1-223ENST00000511081 642 ntTSL 2 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AC091946.1-201ENST00000522350 852 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AC011632.1-203ENST00000522914 454 ntTSL 3 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AC021269.1-201ENST00000526860 705 ntBASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AC090092.1-202ENST00000533591 685 ntTSL 5 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AC078962.3-201ENST00000545821 482 ntTSL 5 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 KRT125P-201ENST00000546827 989 ntBASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AC125611.1-201ENST00000549563 229 ntBASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AL163195.2-203ENST00000553604 573 ntTSL 4 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 BMS1P8-201ENST00000565049 1178 ntBASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 TERF1P2-201ENST00000583350 1212 ntBASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AC005495.1-201ENST00000586611 1211 ntBASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AC010620.1-201ENST00000601088 1102 ntBASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AC005252.1-201ENST00000604518 1063 ntBASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 RBM11P1-201ENST00000604951 799 ntBASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AL157359.3-201ENST00000623771 217 ntBASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AC007671.2-201ENST00000637344 619 ntBASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AL033527.5-201ENST00000641382 801 ntBASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 LINC02211-204ENST00000642024 1070 ntBASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
KRTAP4-4Q9BYR3 TDRD12-201ENST00000421545 1317 ntTSL 5 BASIC4.21□□□□□ -1.73
KRTAP4-4Q9BYR3 AC019069.1-201ENST00000610008 1333 ntBASIC4.21□□□□□ -1.73
KRTAP4-4Q9BYR3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
KRTAP4-4Q9BYR3 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
KRTAP4-4Q9BYR3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
KRTAP4-4Q9BYR3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC4.21□□□□□ -1.73
KRTAP4-4Q9BYR3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC4.21□□□□□ -1.73
KRTAP4-4Q9BYR3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC4.21□□□□□ -1.73
KRTAP4-4Q9BYR3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC4.21□□□□□ -1.73
KRTAP4-4Q9BYR3 AL157700.1-201ENST00000561973 1432 ntBASIC4.21□□□□□ -1.73
KRTAP4-4Q9BYR3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
KRTAP4-4Q9BYR3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms