Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
PDLIM5Q96HC4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDLIM5Q96HC4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.74■□□□□ 0.75
PDLIM5Q96HC4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDLIM5Q96HC4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDLIM5Q96HC4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.74■□□□□ 0.75
PDLIM5Q96HC4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDLIM5Q96HC4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.74■□□□□ 0.75
PDLIM5Q96HC4 IKBKGP1-201ENST00000612193 1073 ntBASIC19.74■□□□□ 0.75
PDLIM5Q96HC4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.74■□□□□ 0.75
PDLIM5Q96HC4 AC073111.5-205ENST00000641717 521 ntBASIC19.74■□□□□ 0.75
PDLIM5Q96HC4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.74■□□□□ 0.75
PDLIM5Q96HC4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDLIM5Q96HC4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.74■□□□□ 0.75
PDLIM5Q96HC4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDLIM5Q96HC4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.73■□□□□ 0.75
PDLIM5Q96HC4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PDLIM5Q96HC4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM5Q96HC4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM5Q96HC4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM5Q96HC4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM5Q96HC4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM5Q96HC4 CDCA4P2-201ENST00000441182 718 ntBASIC19.73■□□□□ 0.75
PDLIM5Q96HC4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.73■□□□□ 0.75
PDLIM5Q96HC4 AL589743.5-201ENST00000616611 1050 ntBASIC19.73■□□□□ 0.75
PDLIM5Q96HC4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PDLIM5Q96HC4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM5Q96HC4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM5Q96HC4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM5Q96HC4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.73■□□□□ 0.75
PDLIM5Q96HC4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
PDLIM5Q96HC4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDLIM5Q96HC4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDLIM5Q96HC4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDLIM5Q96HC4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDLIM5Q96HC4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDLIM5Q96HC4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDLIM5Q96HC4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PDLIM5Q96HC4 AL355472.2-201ENST00000422958 438 ntBASIC19.72■□□□□ 0.75
PDLIM5Q96HC4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.72■□□□□ 0.75
PDLIM5Q96HC4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.72■□□□□ 0.75
PDLIM5Q96HC4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PDLIM5Q96HC4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDLIM5Q96HC4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PDLIM5Q96HC4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDLIM5Q96HC4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
PDLIM5Q96HC4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PDLIM5Q96HC4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDLIM5Q96HC4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.71■□□□□ 0.75
PDLIM5Q96HC4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDLIM5Q96HC4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDLIM5Q96HC4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDLIM5Q96HC4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PDLIM5Q96HC4 KRT8P17-201ENST00000453110 1448 ntBASIC19.71■□□□□ 0.75
PDLIM5Q96HC4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.71■□□□□ 0.75
PDLIM5Q96HC4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.71■□□□□ 0.75
PDLIM5Q96HC4 AC093787.1-201ENST00000450396 207 ntBASIC19.71■□□□□ 0.75
PDLIM5Q96HC4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.71■□□□□ 0.75
PDLIM5Q96HC4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDLIM5Q96HC4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.71■□□□□ 0.75
PDLIM5Q96HC4 RAP2CP1-201ENST00000605103 478 ntBASIC19.71■□□□□ 0.75
PDLIM5Q96HC4 AL137784.2-201ENST00000607332 1000 ntBASIC19.71■□□□□ 0.75
PDLIM5Q96HC4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.71■□□□□ 0.75
PDLIM5Q96HC4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDLIM5Q96HC4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDLIM5Q96HC4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDLIM5Q96HC4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.71■□□□□ 0.75
PDLIM5Q96HC4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDLIM5Q96HC4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDLIM5Q96HC4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PDLIM5Q96HC4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.7■□□□□ 0.74
PDLIM5Q96HC4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM5Q96HC4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM5Q96HC4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM5Q96HC4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.7■□□□□ 0.74
PDLIM5Q96HC4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.7■□□□□ 0.74
PDLIM5Q96HC4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.7■□□□□ 0.74
PDLIM5Q96HC4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM5Q96HC4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PDLIM5Q96HC4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM5Q96HC4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM5Q96HC4 AL691432.2-201ENST00000607222 2038 ntBASIC19.69■□□□□ 0.74
PDLIM5Q96HC4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.69■□□□□ 0.74
PDLIM5Q96HC4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PDLIM5Q96HC4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM5Q96HC4 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.69■□□□□ 0.74
PDLIM5Q96HC4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM5Q96HC4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM5Q96HC4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM5Q96HC4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PDLIM5Q96HC4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM5Q96HC4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM5Q96HC4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.69■□□□□ 0.74
PDLIM5Q96HC4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM5Q96HC4 AC026185.1-201ENST00000445748 174 ntBASIC19.69■□□□□ 0.74
PDLIM5Q96HC4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.69■□□□□ 0.74
PDLIM5Q96HC4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM5Q96HC4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PDLIM5Q96HC4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.69■□□□□ 0.74
PDLIM5Q96HC4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms