Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCML4Q8N228 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCML4Q8N228 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SCML4Q8N228 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SCML4Q8N228 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCML4Q8N228 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
SCML4Q8N228 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
SCML4Q8N228 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.01■□□□□ 0.95
SCML4Q8N228 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCML4Q8N228 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
SCML4Q8N228 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SCML4Q8N228 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SCML4Q8N228 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCML4Q8N228 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SCML4Q8N228 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SCML4Q8N228 POU5F1P3-201ENST00000428824 1078 ntBASIC21.01■□□□□ 0.95
SCML4Q8N228 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.01■□□□□ 0.95
SCML4Q8N228 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.01■□□□□ 0.95
SCML4Q8N228 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.01■□□□□ 0.95
SCML4Q8N228 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.01■□□□□ 0.95
SCML4Q8N228 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.01■□□□□ 0.95
SCML4Q8N228 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCML4Q8N228 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCML4Q8N228 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCML4Q8N228 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SCML4Q8N228 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SCML4Q8N228 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SCML4Q8N228 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCML4Q8N228 AL162377.1-201ENST00000618844 1793 ntBASIC21■□□□□ 0.95
SCML4Q8N228 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21■□□□□ 0.95
SCML4Q8N228 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCML4Q8N228 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21■□□□□ 0.95
SCML4Q8N228 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SCML4Q8N228 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21■□□□□ 0.95
SCML4Q8N228 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21■□□□□ 0.95
SCML4Q8N228 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SCML4Q8N228 ESRRAP1-201ENST00000400596 1257 ntBASIC21■□□□□ 0.95
SCML4Q8N228 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SCML4Q8N228 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21■□□□□ 0.95
SCML4Q8N228 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21■□□□□ 0.95
SCML4Q8N228 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21■□□□□ 0.95
SCML4Q8N228 AC008687.6-201ENST00000596318 630 ntBASIC21■□□□□ 0.95
SCML4Q8N228 AC120498.8-201ENST00000614275 531 ntBASIC21■□□□□ 0.95
SCML4Q8N228 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SCML4Q8N228 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21■□□□□ 0.95
SCML4Q8N228 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SCML4Q8N228 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCML4Q8N228 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SCML4Q8N228 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCML4Q8N228 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21■□□□□ 0.95
SCML4Q8N228 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SCML4Q8N228 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCML4Q8N228 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.99■□□□□ 0.95
SCML4Q8N228 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCML4Q8N228 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.99■□□□□ 0.95
SCML4Q8N228 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCML4Q8N228 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.99■□□□□ 0.95
SCML4Q8N228 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCML4Q8N228 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SCML4Q8N228 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SCML4Q8N228 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.99■□□□□ 0.95
SCML4Q8N228 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SCML4Q8N228 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SCML4Q8N228 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.99■□□□□ 0.95
SCML4Q8N228 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.99■□□□□ 0.95
SCML4Q8N228 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCML4Q8N228 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.99■□□□□ 0.95
SCML4Q8N228 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SCML4Q8N228 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SCML4Q8N228 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCML4Q8N228 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.98■□□□□ 0.95
SCML4Q8N228 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCML4Q8N228 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.98■□□□□ 0.95
SCML4Q8N228 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCML4Q8N228 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCML4Q8N228 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.98■□□□□ 0.95
SCML4Q8N228 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.98■□□□□ 0.95
SCML4Q8N228 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.98■□□□□ 0.95
SCML4Q8N228 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.98■□□□□ 0.95
SCML4Q8N228 AC006557.6-201ENST00000623071 864 ntBASIC20.98■□□□□ 0.95
SCML4Q8N228 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCML4Q8N228 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.98■□□□□ 0.95
SCML4Q8N228 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCML4Q8N228 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCML4Q8N228 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCML4Q8N228 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCML4Q8N228 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.97■□□□□ 0.95
SCML4Q8N228 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCML4Q8N228 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SCML4Q8N228 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SCML4Q8N228 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCML4Q8N228 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCML4Q8N228 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCML4Q8N228 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCML4Q8N228 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCML4Q8N228 ABHD17AP1-201ENST00000358206 933 ntBASIC20.97■□□□□ 0.95
SCML4Q8N228 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCML4Q8N228 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCML4Q8N228 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.97■□□□□ 0.95
SCML4Q8N228 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms