Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 AC023632.3-201ENST00000521633 145 ntBASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 AC005829.2-201ENST00000571422 1056 ntBASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 AL157384.1-201ENST00000445995 2473 ntBASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf40Q8IXQ3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.63■□□□□ 0.57
C9orf40Q8IXQ3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf40Q8IXQ3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.63■□□□□ 0.57
C9orf40Q8IXQ3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
C9orf40Q8IXQ3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf40Q8IXQ3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf40Q8IXQ3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf40Q8IXQ3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf40Q8IXQ3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf40Q8IXQ3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.63■□□□□ 0.57
C9orf40Q8IXQ3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.63■□□□□ 0.57
C9orf40Q8IXQ3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.63■□□□□ 0.57
C9orf40Q8IXQ3 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.63■□□□□ 0.57
C9orf40Q8IXQ3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.63■□□□□ 0.57
C9orf40Q8IXQ3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf40Q8IXQ3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf40Q8IXQ3 SOX15-203ENST00000570788 1093 ntBASIC18.63■□□□□ 0.57
C9orf40Q8IXQ3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.63■□□□□ 0.57
C9orf40Q8IXQ3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf40Q8IXQ3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf40Q8IXQ3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.63■□□□□ 0.57
C9orf40Q8IXQ3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.63■□□□□ 0.57
C9orf40Q8IXQ3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf40Q8IXQ3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
C9orf40Q8IXQ3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf40Q8IXQ3 AC092667.1-201ENST00000434301 2586 ntBASIC18.62■□□□□ 0.57
C9orf40Q8IXQ3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.62■□□□□ 0.57
C9orf40Q8IXQ3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
C9orf40Q8IXQ3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C9orf40Q8IXQ3 TSPY20P-201ENST00000450910 630 ntBASIC18.62■□□□□ 0.57
C9orf40Q8IXQ3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C9orf40Q8IXQ3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C9orf40Q8IXQ3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C9orf40Q8IXQ3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.62■□□□□ 0.57
C9orf40Q8IXQ3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.62■□□□□ 0.57
C9orf40Q8IXQ3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C9orf40Q8IXQ3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C9orf40Q8IXQ3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
C9orf40Q8IXQ3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.62■□□□□ 0.57
C9orf40Q8IXQ3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C9orf40Q8IXQ3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C9orf40Q8IXQ3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
C9orf40Q8IXQ3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C9orf40Q8IXQ3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
C9orf40Q8IXQ3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
C9orf40Q8IXQ3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf40Q8IXQ3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf40Q8IXQ3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf40Q8IXQ3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf40Q8IXQ3 GABARAPL3-202ENST00000624044 1851 ntBASIC18.61■□□□□ 0.57
C9orf40Q8IXQ3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.61■□□□□ 0.57
C9orf40Q8IXQ3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf40Q8IXQ3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf40Q8IXQ3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.61■□□□□ 0.57
C9orf40Q8IXQ3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf40Q8IXQ3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf40Q8IXQ3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf40Q8IXQ3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
C9orf40Q8IXQ3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.61■□□□□ 0.57
C9orf40Q8IXQ3 AP003097.1-201ENST00000530657 1135 ntBASIC18.61■□□□□ 0.57
C9orf40Q8IXQ3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.61■□□□□ 0.57
C9orf40Q8IXQ3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
C9orf40Q8IXQ3 AC006557.6-201ENST00000623071 864 ntBASIC18.61■□□□□ 0.57
C9orf40Q8IXQ3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf40Q8IXQ3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.61■□□□□ 0.57
C9orf40Q8IXQ3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.61■□□□□ 0.57
C9orf40Q8IXQ3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
C9orf40Q8IXQ3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 AL390719.1-204ENST00000412397 1219 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms