Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.92■■□□□ 1.26
PPP4R3AQ6IN85 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PPP4R3AQ6IN85 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
PPP4R3AQ6IN85 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
PPP4R3AQ6IN85 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
PPP4R3AQ6IN85 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PPP4R3AQ6IN85 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
PPP4R3AQ6IN85 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.91■■□□□ 1.26
PPP4R3AQ6IN85 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22.91■■□□□ 1.26
PPP4R3AQ6IN85 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.91■■□□□ 1.26
PPP4R3AQ6IN85 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PPP4R3AQ6IN85 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PPP4R3AQ6IN85 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
PPP4R3AQ6IN85 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22.91■■□□□ 1.26
PPP4R3AQ6IN85 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
PPP4R3AQ6IN85 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PPP4R3AQ6IN85 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.91■■□□□ 1.26
PPP4R3AQ6IN85 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PPP4R3AQ6IN85 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
PPP4R3AQ6IN85 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
PPP4R3AQ6IN85 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
PPP4R3AQ6IN85 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PPP4R3AQ6IN85 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PPP4R3AQ6IN85 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PPP4R3AQ6IN85 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
PPP4R3AQ6IN85 PTBP1P-201ENST00000554374 1601 ntBASIC22.9■■□□□ 1.26
PPP4R3AQ6IN85 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PPP4R3AQ6IN85 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PPP4R3AQ6IN85 DET1-207ENST00000564406 2315 ntTSL 2 BASIC22.9■■□□□ 1.26
PPP4R3AQ6IN85 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PPP4R3AQ6IN85 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PPP4R3AQ6IN85 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PPP4R3AQ6IN85 KLF13-207ENST00000560473 489 ntTSL 3 BASIC22.9■■□□□ 1.26
PPP4R3AQ6IN85 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC22.9■■□□□ 1.26
PPP4R3AQ6IN85 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC22.9■■□□□ 1.26
PPP4R3AQ6IN85 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC22.9■■□□□ 1.26
PPP4R3AQ6IN85 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PPP4R3AQ6IN85 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PPP4R3AQ6IN85 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PPP4R3AQ6IN85 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PPP4R3AQ6IN85 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PPP4R3AQ6IN85 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PPP4R3AQ6IN85 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
PPP4R3AQ6IN85 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PPP4R3AQ6IN85 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.89■■□□□ 1.26
PPP4R3AQ6IN85 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PPP4R3AQ6IN85 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.89■■□□□ 1.26
PPP4R3AQ6IN85 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.89■■□□□ 1.25
PPP4R3AQ6IN85 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.89■■□□□ 1.25
PPP4R3AQ6IN85 APTR-205ENST00000447009 902 ntTSL 2 BASIC22.89■■□□□ 1.25
PPP4R3AQ6IN85 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC22.89■■□□□ 1.25
PPP4R3AQ6IN85 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PPP4R3AQ6IN85 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.88■■□□□ 1.25
PPP4R3AQ6IN85 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.88■■□□□ 1.25
PPP4R3AQ6IN85 DPP3P2-201ENST00000416030 1696 ntBASIC22.88■■□□□ 1.25
PPP4R3AQ6IN85 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PPP4R3AQ6IN85 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
PPP4R3AQ6IN85 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PPP4R3AQ6IN85 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.88■■□□□ 1.25
PPP4R3AQ6IN85 GATS-209ENST00000454084 1030 ntTSL 3 BASIC22.88■■□□□ 1.25
PPP4R3AQ6IN85 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PPP4R3AQ6IN85 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.88■■□□□ 1.25
PPP4R3AQ6IN85 AL157384.1-201ENST00000445995 2473 ntBASIC22.88■■□□□ 1.25
PPP4R3AQ6IN85 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
PPP4R3AQ6IN85 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
PPP4R3AQ6IN85 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PPP4R3AQ6IN85 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
PPP4R3AQ6IN85 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PPP4R3AQ6IN85 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PPP4R3AQ6IN85 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PPP4R3AQ6IN85 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
PPP4R3AQ6IN85 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PPP4R3AQ6IN85 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PPP4R3AQ6IN85 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
PPP4R3AQ6IN85 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22.87■■□□□ 1.25
PPP4R3AQ6IN85 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PPP4R3AQ6IN85 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
PPP4R3AQ6IN85 CRK-204ENST00000574295 1391 ntTSL 5 BASIC22.87■■□□□ 1.25
PPP4R3AQ6IN85 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.87■■□□□ 1.25
PPP4R3AQ6IN85 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PPP4R3AQ6IN85 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PPP4R3AQ6IN85 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PPP4R3AQ6IN85 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PPP4R3AQ6IN85 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
PPP4R3AQ6IN85 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PPP4R3AQ6IN85 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PPP4R3AQ6IN85 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.86■■□□□ 1.25
PPP4R3AQ6IN85 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PPP4R3AQ6IN85 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.86■■□□□ 1.25
PPP4R3AQ6IN85 AC023632.3-201ENST00000521633 145 ntBASIC22.86■■□□□ 1.25
PPP4R3AQ6IN85 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC22.86■■□□□ 1.25
PPP4R3AQ6IN85 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PPP4R3AQ6IN85 HLA-B-256ENST00000639848 1089 ntBASIC22.86■■□□□ 1.25
PPP4R3AQ6IN85 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PPP4R3AQ6IN85 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
PPP4R3AQ6IN85 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PPP4R3AQ6IN85 AL162377.1-201ENST00000618844 1793 ntBASIC22.86■■□□□ 1.25
PPP4R3AQ6IN85 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PPP4R3AQ6IN85 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PPP4R3AQ6IN85 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms