Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALFQ53S48 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALFQ53S48 AC092368.3-202ENST00000574180 1591 ntBASIC20.75■□□□□ 0.91
ALFQ53S48 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALFQ53S48 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ALFQ53S48 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALFQ53S48 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ALFQ53S48 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ALFQ53S48 AL157384.1-201ENST00000445995 2473 ntBASIC20.75■□□□□ 0.91
ALFQ53S48 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALFQ53S48 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALFQ53S48 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALFQ53S48 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.74■□□□□ 0.91
ALFQ53S48 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALFQ53S48 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.74■□□□□ 0.91
ALFQ53S48 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALFQ53S48 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALFQ53S48 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALFQ53S48 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALFQ53S48 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALFQ53S48 PNMA6B-201ENST00000538162 1200 ntBASIC20.74■□□□□ 0.91
ALFQ53S48 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALFQ53S48 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.74■□□□□ 0.91
ALFQ53S48 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ALFQ53S48 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALFQ53S48 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALFQ53S48 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ALFQ53S48 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
ALFQ53S48 PTBP1P-201ENST00000554374 1601 ntBASIC20.74■□□□□ 0.91
ALFQ53S48 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ALFQ53S48 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALFQ53S48 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.74■□□□□ 0.91
ALFQ53S48 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALFQ53S48 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ALFQ53S48 DPP3P2-201ENST00000416030 1696 ntBASIC20.73■□□□□ 0.91
ALFQ53S48 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ALFQ53S48 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ALFQ53S48 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ALFQ53S48 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.73■□□□□ 0.91
ALFQ53S48 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ALFQ53S48 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ALFQ53S48 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
ALFQ53S48 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ALFQ53S48 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ALFQ53S48 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ALFQ53S48 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.73■□□□□ 0.91
ALFQ53S48 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.73■□□□□ 0.91
ALFQ53S48 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.73■□□□□ 0.91
ALFQ53S48 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.73■□□□□ 0.91
ALFQ53S48 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
ALFQ53S48 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ALFQ53S48 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.73■□□□□ 0.91
ALFQ53S48 AP005212.1-201ENST00000581547 1997 ntBASIC20.73■□□□□ 0.91
ALFQ53S48 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ALFQ53S48 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.73■□□□□ 0.91
ALFQ53S48 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.73■□□□□ 0.91
ALFQ53S48 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ALFQ53S48 AC020907.5-201ENST00000624372 1936 ntBASIC20.72■□□□□ 0.91
ALFQ53S48 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.72■□□□□ 0.91
ALFQ53S48 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ALFQ53S48 AC092667.1-201ENST00000434301 2586 ntBASIC20.72■□□□□ 0.91
ALFQ53S48 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
ALFQ53S48 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ALFQ53S48 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.72■□□□□ 0.91
ALFQ53S48 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ALFQ53S48 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
ALFQ53S48 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.72■□□□□ 0.91
ALFQ53S48 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.72■□□□□ 0.91
ALFQ53S48 UNC93B5-201ENST00000530315 699 ntBASIC20.72■□□□□ 0.91
ALFQ53S48 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.72■□□□□ 0.91
ALFQ53S48 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.72■□□□□ 0.91
ALFQ53S48 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ALFQ53S48 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ALFQ53S48 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ALFQ53S48 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ALFQ53S48 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ALFQ53S48 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ALFQ53S48 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ALFQ53S48 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ALFQ53S48 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ALFQ53S48 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ALFQ53S48 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.71■□□□□ 0.91
ALFQ53S48 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ALFQ53S48 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.71■□□□□ 0.91
ALFQ53S48 TSPY20P-201ENST00000450910 630 ntBASIC20.71■□□□□ 0.91
ALFQ53S48 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.71■□□□□ 0.91
ALFQ53S48 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.71■□□□□ 0.91
ALFQ53S48 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.71■□□□□ 0.91
ALFQ53S48 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.71■□□□□ 0.91
ALFQ53S48 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ALFQ53S48 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.71■□□□□ 0.91
ALFQ53S48 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.71■□□□□ 0.91
ALFQ53S48 SMG8-203ENST00000578922 2178 ntBASIC20.7■□□□□ 0.91
ALFQ53S48 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ALFQ53S48 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ALFQ53S48 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.7■□□□□ 0.9
ALFQ53S48 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ALFQ53S48 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ALFQ53S48 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.7■□□□□ 0.9
ALFQ53S48 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms