Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
VSX2P58304 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VSX2P58304 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VSX2P58304 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VSX2P58304 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VSX2P58304 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VSX2P58304 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VSX2P58304 ABHD17AP1-201ENST00000358206 933 ntBASIC19.29■□□□□ 0.68
VSX2P58304 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VSX2P58304 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
VSX2P58304 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.29■□□□□ 0.68
VSX2P58304 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.29■□□□□ 0.68
VSX2P58304 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
VSX2P58304 FAM201B-201ENST00000458407 597 ntBASIC19.29■□□□□ 0.68
VSX2P58304 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.29■□□□□ 0.68
VSX2P58304 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
VSX2P58304 UNC93B5-201ENST00000530315 699 ntBASIC19.29■□□□□ 0.68
VSX2P58304 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VSX2P58304 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
VSX2P58304 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VSX2P58304 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VSX2P58304 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
VSX2P58304 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
VSX2P58304 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VSX2P58304 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.28■□□□□ 0.68
VSX2P58304 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.28■□□□□ 0.68
VSX2P58304 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VSX2P58304 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VSX2P58304 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VSX2P58304 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VSX2P58304 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
VSX2P58304 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.28■□□□□ 0.68
VSX2P58304 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
VSX2P58304 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.28■□□□□ 0.68
VSX2P58304 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
VSX2P58304 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.28■□□□□ 0.68
VSX2P58304 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
VSX2P58304 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
VSX2P58304 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VSX2P58304 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VSX2P58304 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VSX2P58304 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.27■□□□□ 0.68
VSX2P58304 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VSX2P58304 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VSX2P58304 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
VSX2P58304 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VSX2P58304 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VSX2P58304 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VSX2P58304 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
VSX2P58304 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.27■□□□□ 0.68
VSX2P58304 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
VSX2P58304 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
VSX2P58304 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.27■□□□□ 0.68
VSX2P58304 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VSX2P58304 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
VSX2P58304 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
VSX2P58304 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VSX2P58304 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.27■□□□□ 0.67
VSX2P58304 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.27■□□□□ 0.67
VSX2P58304 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
VSX2P58304 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
VSX2P58304 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.26■□□□□ 0.67
VSX2P58304 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VSX2P58304 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.26■□□□□ 0.67
VSX2P58304 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VSX2P58304 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VSX2P58304 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.26■□□□□ 0.67
VSX2P58304 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.26■□□□□ 0.67
VSX2P58304 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VSX2P58304 ESRRAP1-201ENST00000400596 1257 ntBASIC19.26■□□□□ 0.67
VSX2P58304 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.26■□□□□ 0.67
VSX2P58304 POU5F1P3-201ENST00000428824 1078 ntBASIC19.26■□□□□ 0.67
VSX2P58304 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.26■□□□□ 0.67
VSX2P58304 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.26■□□□□ 0.67
VSX2P58304 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VSX2P58304 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
VSX2P58304 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VSX2P58304 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VSX2P58304 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VSX2P58304 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
VSX2P58304 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VSX2P58304 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
VSX2P58304 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VSX2P58304 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.25■□□□□ 0.67
VSX2P58304 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.25■□□□□ 0.67
VSX2P58304 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
VSX2P58304 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VSX2P58304 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.25■□□□□ 0.67
VSX2P58304 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VSX2P58304 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VSX2P58304 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
VSX2P58304 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VSX2P58304 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.25■□□□□ 0.67
VSX2P58304 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.25■□□□□ 0.67
VSX2P58304 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VSX2P58304 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VSX2P58304 SOX15-203ENST00000570788 1093 ntBASIC19.25■□□□□ 0.67
VSX2P58304 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VSX2P58304 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VSX2P58304 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms