Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.32■□□□□ 0.84
LIMK2P53671 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK2P53671 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.32■□□□□ 0.84
LIMK2P53671 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
LIMK2P53671 AC091799.1-201ENST00000422823 811 ntBASIC20.32■□□□□ 0.84
LIMK2P53671 AC073210.2-201ENST00000430369 194 ntBASIC20.32■□□□□ 0.84
LIMK2P53671 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK2P53671 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.32■□□□□ 0.84
LIMK2P53671 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.32■□□□□ 0.84
LIMK2P53671 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK2P53671 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.32■□□□□ 0.84
LIMK2P53671 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.32■□□□□ 0.84
LIMK2P53671 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.32■□□□□ 0.84
LIMK2P53671 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK2P53671 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
LIMK2P53671 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK2P53671 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
LIMK2P53671 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.31■□□□□ 0.84
LIMK2P53671 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.31■□□□□ 0.84
LIMK2P53671 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LIMK2P53671 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LIMK2P53671 RBM17P2-201ENST00000616397 1405 ntBASIC20.31■□□□□ 0.84
LIMK2P53671 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LIMK2P53671 CYP2T1P-201ENST00000432607 1285 ntBASIC20.31■□□□□ 0.84
LIMK2P53671 AC069152.1-201ENST00000438030 544 ntBASIC20.31■□□□□ 0.84
LIMK2P53671 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.31■□□□□ 0.84
LIMK2P53671 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.31■□□□□ 0.84
LIMK2P53671 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.31■□□□□ 0.84
LIMK2P53671 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.31■□□□□ 0.84
LIMK2P53671 AC133041.1-202ENST00000642053 222 ntBASIC20.31■□□□□ 0.84
LIMK2P53671 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LIMK2P53671 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LIMK2P53671 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.31■□□□□ 0.84
LIMK2P53671 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LIMK2P53671 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LIMK2P53671 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LIMK2P53671 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LIMK2P53671 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LIMK2P53671 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LIMK2P53671 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LIMK2P53671 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LIMK2P53671 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LIMK2P53671 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.3■□□□□ 0.84
LIMK2P53671 SMG8-203ENST00000578922 2178 ntBASIC20.3■□□□□ 0.84
LIMK2P53671 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.3■□□□□ 0.84
LIMK2P53671 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LIMK2P53671 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.3■□□□□ 0.84
LIMK2P53671 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LIMK2P53671 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LIMK2P53671 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LIMK2P53671 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.3■□□□□ 0.84
LIMK2P53671 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LIMK2P53671 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LIMK2P53671 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LIMK2P53671 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LIMK2P53671 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LIMK2P53671 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.29■□□□□ 0.84
LIMK2P53671 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.29■□□□□ 0.84
LIMK2P53671 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LIMK2P53671 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LIMK2P53671 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.29■□□□□ 0.84
LIMK2P53671 OR10C1-204ENST00000622521 1039 ntBASIC20.29■□□□□ 0.84
LIMK2P53671 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LIMK2P53671 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LIMK2P53671 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LIMK2P53671 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.29■□□□□ 0.84
LIMK2P53671 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LIMK2P53671 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LIMK2P53671 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LIMK2P53671 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.28■□□□□ 0.84
LIMK2P53671 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LIMK2P53671 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.28■□□□□ 0.84
LIMK2P53671 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LIMK2P53671 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LIMK2P53671 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.28■□□□□ 0.84
LIMK2P53671 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LIMK2P53671 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
LIMK2P53671 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LIMK2P53671 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LIMK2P53671 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LIMK2P53671 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.28■□□□□ 0.84
LIMK2P53671 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
LIMK2P53671 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
LIMK2P53671 AC007322.3-201ENST00000426526 701 ntBASIC20.28■□□□□ 0.84
LIMK2P53671 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.28■□□□□ 0.84
LIMK2P53671 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.28■□□□□ 0.84
LIMK2P53671 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
LIMK2P53671 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
LIMK2P53671 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.28■□□□□ 0.84
LIMK2P53671 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LIMK2P53671 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.28■□□□□ 0.84
LIMK2P53671 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
LIMK2P53671 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LIMK2P53671 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LIMK2P53671 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LIMK2P53671 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
LIMK2P53671 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LIMK2P53671 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LIMK2P53671 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
LIMK2P53671 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms