Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLK1P49759 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLK1P49759 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
CLK1P49759 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLK1P49759 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLK1P49759 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
CLK1P49759 KRT18P5-201ENST00000436075 1291 ntBASIC18.86■□□□□ 0.61
CLK1P49759 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.86■□□□□ 0.61
CLK1P49759 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLK1P49759 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.86■□□□□ 0.61
CLK1P49759 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CLK1P49759 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.86■□□□□ 0.61
CLK1P49759 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.86■□□□□ 0.61
CLK1P49759 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLK1P49759 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLK1P49759 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.86■□□□□ 0.61
CLK1P49759 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLK1P49759 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLK1P49759 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.86■□□□□ 0.61
CLK1P49759 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLK1P49759 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.85■□□□□ 0.61
CLK1P49759 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.85■□□□□ 0.61
CLK1P49759 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLK1P49759 AC061975.6-201ENST00000579045 1553 ntBASIC18.85■□□□□ 0.61
CLK1P49759 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CLK1P49759 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CLK1P49759 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CLK1P49759 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CLK1P49759 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLK1P49759 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLK1P49759 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CLK1P49759 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.85■□□□□ 0.61
CLK1P49759 MIR935-201ENST00000401179 91 ntBASIC18.85■□□□□ 0.61
CLK1P49759 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CLK1P49759 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.85■□□□□ 0.61
CLK1P49759 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLK1P49759 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLK1P49759 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLK1P49759 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CLK1P49759 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.85■□□□□ 0.61
CLK1P49759 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLK1P49759 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLK1P49759 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLK1P49759 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLK1P49759 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.84■□□□□ 0.61
CLK1P49759 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLK1P49759 KRT18P11-201ENST00000435214 1283 ntBASIC18.84■□□□□ 0.61
CLK1P49759 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.84■□□□□ 0.61
CLK1P49759 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.84■□□□□ 0.61
CLK1P49759 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.84■□□□□ 0.61
CLK1P49759 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.84■□□□□ 0.61
CLK1P49759 KRT18P61-201ENST00000585825 1298 ntBASIC18.84■□□□□ 0.61
CLK1P49759 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.84■□□□□ 0.61
CLK1P49759 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.84■□□□□ 0.61
CLK1P49759 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CLK1P49759 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLK1P49759 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.84■□□□□ 0.61
CLK1P49759 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLK1P49759 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLK1P49759 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLK1P49759 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLK1P49759 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CLK1P49759 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
CLK1P49759 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLK1P49759 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
CLK1P49759 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLK1P49759 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.83■□□□□ 0.61
CLK1P49759 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLK1P49759 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CLK1P49759 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CLK1P49759 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLK1P49759 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLK1P49759 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLK1P49759 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.83■□□□□ 0.6
CLK1P49759 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CLK1P49759 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.83■□□□□ 0.6
CLK1P49759 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLK1P49759 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.83■□□□□ 0.6
CLK1P49759 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.83■□□□□ 0.6
CLK1P49759 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLK1P49759 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.83■□□□□ 0.6
CLK1P49759 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLK1P49759 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLK1P49759 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLK1P49759 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CLK1P49759 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.83■□□□□ 0.6
CLK1P49759 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
CLK1P49759 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLK1P49759 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLK1P49759 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
CLK1P49759 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLK1P49759 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CLK1P49759 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLK1P49759 SMG8-203ENST00000578922 2178 ntBASIC18.82■□□□□ 0.6
CLK1P49759 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLK1P49759 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLK1P49759 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CLK1P49759 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.82■□□□□ 0.6
CLK1P49759 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLK1P49759 AL162430.1-201ENST00000480705 870 ntBASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms