Protein–RNA interactions for Protein: P49686

NUP42, Nucleoporin NUP42, yeastyeast

Known RBP Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP42P49686 APC1YNL172W 5247 nt3.27□□□□□ -1.89
NUP42P49686 MDM1YML104C 3384 nt3.27□□□□□ -1.89
NUP42P49686 PHO91YNR013C 2685 nt3.27□□□□□ -1.89
NUP42P49686 FLO1YAR050W 4614 nt3.26□□□□□ -1.89
NUP42P49686 RPS30BYOR182C 192 nt3.26□□□□□ -1.89
NUP42P49686 FAS2YPL231W 5664 nt3.26□□□□□ -1.89
NUP42P49686 VPS8YAL002W 3825 nt3.25□□□□□ -1.89
NUP42P49686 RAD26YJR035W 3258 nt3.25□□□□□ -1.89
NUP42P49686 YFL065CYFL065C 309 nt3.25□□□□□ -1.89
NUP42P49686 tL(UAA)QtL(UAA)Q 85 nt3.25□□□□□ -1.89
NUP42P49686 YIL134C-AYIL134C-A 204 nt3.25□□□□□ -1.89
NUP42P49686 YPR203WYPR203W 309 nt3.25□□□□□ -1.89
NUP42P49686 SPO71YDR104C 3738 nt3.25□□□□□ -1.89
NUP42P49686 ATG11YPR049C 3537 nt3.25□□□□□ -1.89
NUP42P49686 MLH3YPL164C 2148 nt3.25□□□□□ -1.89
NUP42P49686 STU1YBL034C 4542 nt3.25□□□□□ -1.89
NUP42P49686 SAP190YKR028W 3102 nt3.24□□□□□ -1.89
NUP42P49686 MTR4YJL050W 3222 nt3.24□□□□□ -1.89
NUP42P49686 YOR019WYOR019W 2193 nt3.24□□□□□ -1.89
NUP42P49686 MRPL39YML009C 213 nt3.23□□□□□ -1.89
NUP42P49686 BUD2YKL092C 3315 nt3.23□□□□□ -1.89
NUP42P49686 KAP104YBR017C 2757 nt3.23□□□□□ -1.89
NUP42P49686 PRP5YBR237W 2550 nt3.22□□□□□ -1.89
NUP42P49686 YCR038W-AYCR038W-A 126 nt3.22□□□□□ -1.89
NUP42P49686 TRS130YMR218C 3309 nt3.22□□□□□ -1.89
NUP42P49686 TAF1YGR274C 3201 nt3.21□□□□□ -1.89
NUP42P49686 POL2YNL262W 6669 nt3.21□□□□□ -1.9
NUP42P49686 tS(AGA)D3tS(AGA)D3 83 nt3.21□□□□□ -1.9
NUP42P49686 CDC31YOR257W 486 nt3.21□□□□□ -1.9
NUP42P49686 RDS1YCR106W 2499 nt3.21□□□□□ -1.9
NUP42P49686 IFH1YLR223C 3258 nt3.2□□□□□ -1.9
NUP42P49686 MET18YIL128W 3099 nt3.2□□□□□ -1.9
NUP42P49686 POL3YDL102W 3294 nt3.2□□□□□ -1.9
NUP42P49686 YIL156W-BYIL156W-B 222 nt3.2□□□□□ -1.9
NUP42P49686 YAL064W-BYAL064W-B 381 nt3.2□□□□□ -1.9
NUP42P49686 COX12YLR038C 252 nt3.2□□□□□ -1.9
NUP42P49686 SWH1YAR042W 3567 nt3.2□□□□□ -1.9
NUP42P49686 SOM1YEL059C-A 225 nt3.19□□□□□ -1.9
NUP42P49686 tQ(UUG)CtQ(UUG)C 72 nt3.19□□□□□ -1.9
NUP42P49686 tQ(UUG)D1tQ(UUG)D1 72 nt3.19□□□□□ -1.9
NUP42P49686 tQ(UUG)D2tQ(UUG)D2 72 nt3.19□□□□□ -1.9
NUP42P49686 tQ(UUG)D3tQ(UUG)D3 72 nt3.19□□□□□ -1.9
NUP42P49686 tQ(UUG)E1tQ(UUG)E1 72 nt3.19□□□□□ -1.9
NUP42P49686 tQ(UUG)HtQ(UUG)H 72 nt3.19□□□□□ -1.9
NUP42P49686 tQ(UUG)LtQ(UUG)L 72 nt3.19□□□□□ -1.9
NUP42P49686 ALK1YGL021W 2283 nt3.19□□□□□ -1.9
NUP42P49686 RPB2YOR151C 3675 nt3.19□□□□□ -1.9
NUP42P49686 YDR239CYDR239C 2364 nt3.18□□□□□ -1.9
NUP42P49686 JSN1YJR091C 3276 nt3.18□□□□□ -1.9
NUP42P49686 YDR354C-AYDR354C-A 144 nt3.18□□□□□ -1.9
NUP42P49686 ANB1YJR047C 474 nt3.18□□□□□ -1.9
NUP42P49686 HMI1YOL095C 2121 nt3.18□□□□□ -1.9
NUP42P49686 NUP100YKL068W 2880 nt3.18□□□□□ -1.9
NUP42P49686 YDR521WYDR521W 336 nt3.17□□□□□ -1.9
NUP42P49686 ILS1YBL076C 3219 nt3.16□□□□□ -1.9
NUP42P49686 TTI1YKL033W 3117 nt3.16□□□□□ -1.9
NUP42P49686 CHS6YJL099W 2241 nt3.16□□□□□ -1.9
NUP42P49686 YIL002W-AYIL002W-A 210 nt3.15□□□□□ -1.91
NUP42P49686 RPL14AYKL006W 417 nt3.15□□□□□ -1.91
NUP42P49686 RAX2YLR084C 3663 nt3.14□□□□□ -1.91
NUP42P49686 APL1YJR005W 2103 nt3.13□□□□□ -1.91
NUP42P49686 PKH2YOL100W 3246 nt3.13□□□□□ -1.91
NUP42P49686 YGL041C-BYGL041C-B 183 nt3.13□□□□□ -1.91
NUP42P49686 STF2YGR008C 255 nt3.13□□□□□ -1.91
NUP42P49686 SKP2YNL311C 2292 nt3.13□□□□□ -1.91
NUP42P49686 STU2YLR045C 2667 nt3.13□□□□□ -1.91
NUP42P49686 MSH5YDL154W 2706 nt3.13□□□□□ -1.91
NUP42P49686 YJL026C-AYJL026C-A 222 nt3.12□□□□□ -1.91
NUP42P49686 RPN1YHR027C 2982 nt3.11□□□□□ -1.91
NUP42P49686 AGC1YPR021C 2709 nt3.11□□□□□ -1.91
NUP42P49686 NMD2YHR077C 3270 nt3.11□□□□□ -1.91
NUP42P49686 YNL144CYNL144C 2223 nt3.11□□□□□ -1.91
NUP42P49686 CTR9YOL145C 3234 nt3.1□□□□□ -1.91
NUP42P49686 SPT6YGR116W 4356 nt3.1□□□□□ -1.91
NUP42P49686 YDL118WYDL118W 381 nt3.1□□□□□ -1.91
NUP42P49686 RPS29AYLR388W 171 nt3.1□□□□□ -1.91
NUP42P49686 CDC60YPL160W 3273 nt3.09□□□□□ -1.91
NUP42P49686 PET309YLR067C 2898 nt3.09□□□□□ -1.91
NUP42P49686 YIL174WYIL174W 228 nt3.09□□□□□ -1.91
NUP42P49686 YJL222W-AYJL222W-A 228 nt3.09□□□□□ -1.91
NUP42P49686 RDN5-1RDN5-1 121 nt3.09□□□□□ -1.91
NUP42P49686 RDN5-6RDN5-6 121 nt3.09□□□□□ -1.91
NUP42P49686 RPL33AYPL143W 324 nt3.09□□□□□ -1.91
NUP42P49686 NCR1YPL006W 3513 nt3.09□□□□□ -1.91
NUP42P49686 RSE1YML049C 4086 nt3.08□□□□□ -1.92
NUP42P49686 SCP160YJL080C 3669 nt3.08□□□□□ -1.92
NUP42P49686 TRL1YJL087C 2484 nt3.08□□□□□ -1.92
NUP42P49686 GEA1YJR031C 4227 nt3.08□□□□□ -1.92
NUP42P49686 NEW1YPL226W 3591 nt3.07□□□□□ -1.92
NUP42P49686 SLI15YBR156C 2097 nt3.07□□□□□ -1.92
NUP42P49686 IRE1YHR079C 3348 nt3.07□□□□□ -1.92
NUP42P49686 MDN1YLR106C 14733 nt3.06□□□□□ -1.92
NUP42P49686 DYN2YDR424C 279 nt3.06□□□□□ -1.92
NUP42P49686 FAR11YNL127W 2862 nt3.06□□□□□ -1.92
NUP42P49686 YLR278CYLR278C 4026 nt3.05□□□□□ -1.92
NUP42P49686 YIL142C-AYIL142C-A 333 nt3.05□□□□□ -1.92
NUP42P49686 COG4YPR105C 2586 nt3.05□□□□□ -1.92
NUP42P49686 UTP8YGR128C 2142 nt3.04□□□□□ -1.92
NUP42P49686 SGM1YJR134C 2124 nt3.03□□□□□ -1.92
NUP42P49686 YLL054CYLL054C 2532 nt3.03□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 7.5 ms