Protein–RNA interactions for Protein: P38902

RPB11, DNA-directed RNA polymerase II subunit RPB11, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB11P38902 15S_rRNA15S_rRNA 1649 nt-0.02□□□□□ -2.41
RPB11P38902 PMP1YCR024C-A 123 nt-0.02□□□□□ -2.41
RPB11P38902 YDL152WYDL152W 366 nt-0.02□□□□□ -2.41
RPB11P38902 YDR114CYDR114C 303 nt-0.02□□□□□ -2.41
RPB11P38902 SUS1YBR111W-A 291 nt-0.02□□□□□ -2.41
RPB11P38902 RSM27YGR215W 333 nt-0.03□□□□□ -2.41
RPB11P38902 UPS1YLR193C 528 nt-0.03□□□□□ -2.41
RPB11P38902 ATP20YPR020W 348 nt-0.03□□□□□ -2.41
RPB11P38902 COG4YPR105C 2586 nt-0.03□□□□□ -2.41
RPB11P38902 BIR1YJR089W 2865 nt-0.04□□□□□ -2.42
RPB11P38902 IQG1YPL242C 4488 nt-0.04□□□□□ -2.42
RPB11P38902 RMD6YEL072W 696 nt-0.04□□□□□ -2.42
RPB11P38902 YER038W-AYER038W-A 381 nt-0.05□□□□□ -2.42
RPB11P38902 CMS1YLR003C 876 nt-0.05□□□□□ -2.42
RPB11P38902 LOA1YPR139C 903 nt-0.05□□□□□ -2.42
RPB11P38902 YBL100W-BYBL100W-B 5313 nt-0.05□□□□□ -2.42
RPB11P38902 NOP9YJL010C 2001 nt-0.05□□□□□ -2.42
RPB11P38902 YDR182W-AYDR182W-A 204 nt-0.06□□□□□ -2.42
RPB11P38902 RRT1YBL048W 312 nt-0.06□□□□□ -2.42
RPB11P38902 PET111YMR257C 2403 nt-0.06□□□□□ -2.42
RPB11P38902 WIP1YDR374W-A 270 nt-0.07□□□□□ -2.42
RPB11P38902 SPO13YHR014W 876 nt-0.07□□□□□ -2.42
RPB11P38902 GPX1YKL026C 504 nt-0.07□□□□□ -2.42
RPB11P38902 RPL26AYLR344W 384 nt-0.07□□□□□ -2.42
RPB11P38902 ESP1YGR098C 4893 nt-0.07□□□□□ -2.42
RPB11P38902 VIK1YPL253C 1944 nt-0.07□□□□□ -2.42
RPB11P38902 SPO23YBR250W 1572 nt-0.07□□□□□ -2.42
RPB11P38902 snR79snR79 84 nt-0.08□□□□□ -2.42
RPB11P38902 RUB1YDR139C 234 nt-0.08□□□□□ -2.42
RPB11P38902 RPL9AYGL147C 576 nt-0.08□□□□□ -2.42
RPB11P38902 DFG10YIL049W 762 nt-0.08□□□□□ -2.42
RPB11P38902 YMR158C-AYMR158C-A 138 nt-0.08□□□□□ -2.42
RPB11P38902 ATG16YMR159C 453 nt-0.08□□□□□ -2.42
RPB11P38902 snR13snR13 124 nt-0.08□□□□□ -2.42
RPB11P38902 DAD1YDR016C 285 nt-0.09□□□□□ -2.42
RPB11P38902 YLR252WYLR252W 306 nt-0.09□□□□□ -2.42
RPB11P38902 PKH2YOL100W 3246 nt-0.09□□□□□ -2.42
RPB11P38902 MLP1YKR095W 5628 nt-0.1□□□□□ -2.42
RPB11P38902 tF(GAA)BtF(GAA)B 73 nt-0.1□□□□□ -2.43
RPB11P38902 tF(GAA)FtF(GAA)F 73 nt-0.1□□□□□ -2.43
RPB11P38902 tF(GAA)GtF(GAA)G 73 nt-0.1□□□□□ -2.43
RPB11P38902 tF(GAA)H1tF(GAA)H1 73 nt-0.1□□□□□ -2.43
RPB11P38902 tF(GAA)H2tF(GAA)H2 73 nt-0.1□□□□□ -2.43
RPB11P38902 tF(GAA)MtF(GAA)M 73 nt-0.1□□□□□ -2.43
RPB11P38902 tF(GAA)P1tF(GAA)P1 73 nt-0.1□□□□□ -2.43
RPB11P38902 tF(GAA)P2tF(GAA)P2 73 nt-0.1□□□□□ -2.43
RPB11P38902 YJL127W-AYJL127W-A 117 nt-0.1□□□□□ -2.43
RPB11P38902 YOR053WYOR053W 342 nt-0.1□□□□□ -2.43
RPB11P38902 ENV11YGR071C 2583 nt-0.11□□□□□ -2.43
RPB11P38902 MLP2YIL149C 5040 nt-0.11□□□□□ -2.43
RPB11P38902 IRC2YDR112W 309 nt-0.11□□□□□ -2.43
RPB11P38902 RPS30AYLR287C-A 192 nt-0.11□□□□□ -2.43
RPB11P38902 COX7YMR256C 183 nt-0.11□□□□□ -2.43
RPB11P38902 STE5YDR103W 2754 nt-0.12□□□□□ -2.43
RPB11P38902 STF2YGR008C 255 nt-0.12□□□□□ -2.43
RPB11P38902 PRP5YBR237W 2550 nt-0.13□□□□□ -2.43
RPB11P38902 snR59snR59 78 nt-0.13□□□□□ -2.43
RPB11P38902 snR84snR84 550 nt-0.13□□□□□ -2.43
RPB11P38902 BIG1YHR101C 1008 nt-0.13□□□□□ -2.43
RPB11P38902 YMR153C-AYMR153C-A 336 nt-0.13□□□□□ -2.43
RPB11P38902 RPL32YBL092W 393 nt-0.13□□□□□ -2.43
RPB11P38902 RCN2YOR220W 798 nt-0.13□□□□□ -2.43
RPB11P38902 PAN3YKL025C 2040 nt-0.14□□□□□ -2.43
RPB11P38902 SEC8YPR055W 3198 nt-0.15□□□□□ -2.43
RPB11P38902 YDR344CYDR344C 444 nt-0.15□□□□□ -2.43
RPB11P38902 QCR7YDR529C 384 nt-0.15□□□□□ -2.43
RPB11P38902 SPO11YHL022C 1197 nt-0.15□□□□□ -2.43
RPB11P38902 YHL042WYHL042W 453 nt-0.15□□□□□ -2.43
RPB11P38902 tT(UGU)Q1tT(UGU)Q1 76 nt-0.15□□□□□ -2.43
RPB11P38902 YPL119C-AYPL119C-A 264 nt-0.15□□□□□ -2.43
RPB11P38902 YPR099CYPR099C 357 nt-0.15□□□□□ -2.43
RPB11P38902 YDR008CYDR008C 351 nt-0.16□□□□□ -2.44
RPB11P38902 VMA21YGR105W 234 nt-0.16□□□□□ -2.44
RPB11P38902 RPC10YHR143W-A 213 nt-0.16□□□□□ -2.44
RPB11P38902 UBC7YMR022W 498 nt-0.16□□□□□ -2.44
RPB11P38902 MRPL50YNR022C 420 nt-0.16□□□□□ -2.44
RPB11P38902 TYE7YOR344C 876 nt-0.16□□□□□ -2.44
RPB11P38902 YBR071WYBR071W 636 nt-0.16□□□□□ -2.44
RPB11P38902 snR34snR34 203 nt-0.16□□□□□ -2.44
RPB11P38902 COG8YML071C 1824 nt-0.16□□□□□ -2.44
RPB11P38902 NPC2YDL046W 522 nt-0.17□□□□□ -2.44
RPB11P38902 BSC3YLR465C 309 nt-0.17□□□□□ -2.44
RPB11P38902 HUG1YML058W-A 207 nt-0.17□□□□□ -2.44
RPB11P38902 YOR364WYOR364W 369 nt-0.17□□□□□ -2.44
RPB11P38902 snR190snR190 190 nt-0.17□□□□□ -2.44
RPB11P38902 YLL032CYLL032C 2478 nt-0.18□□□□□ -2.44
RPB11P38902 YER158W-AYER158W-A 216 nt-0.18□□□□□ -2.44
RPB11P38902 YJR140W-AYJR140W-A 150 nt-0.18□□□□□ -2.44
RPB11P38902 FYV10YIL097W 1551 nt-0.19□□□□□ -2.44
RPB11P38902 YFR057WYFR057W 456 nt-0.19□□□□□ -2.44
RPB11P38902 YOR192C-BYOR192C-B 5313 nt-0.19□□□□□ -2.44
RPB11P38902 GPG1YGL121C 381 nt-0.2□□□□□ -2.44
RPB11P38902 YLR232WYLR232W 348 nt-0.2□□□□□ -2.44
RPB11P38902 CDC33YOL139C 642 nt-0.2□□□□□ -2.44
RPB11P38902 YBR121C-AYBR121C-A 159 nt-0.2□□□□□ -2.44
RPB11P38902 PRP42YDR235W 1635 nt-0.2□□□□□ -2.44
RPB11P38902 YOL106WYOL106W 354 nt-0.21□□□□□ -2.44
RPB11P38902 RPL35AYDL191W 363 nt-0.22□□□□□ -2.44
RPB11P38902 YER078W-AYER078W-A 165 nt-0.22□□□□□ -2.44
RPB11P38902 MRPL31YKL138C 396 nt-0.22□□□□□ -2.44
Retrieved 100 of 7,029 protein–RNA pairs in 24.9 ms