Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN7P35236 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN7P35236 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN7P35236 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN7P35236 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN7P35236 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PTPN7P35236 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN7P35236 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.87■□□□□ 0.93
PTPN7P35236 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.87■□□□□ 0.93
PTPN7P35236 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.87■□□□□ 0.93
PTPN7P35236 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN7P35236 RARRES2P4-201ENST00000514074 484 ntBASIC20.87■□□□□ 0.93
PTPN7P35236 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.87■□□□□ 0.93
PTPN7P35236 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.87■□□□□ 0.93
PTPN7P35236 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN7P35236 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN7P35236 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PTPN7P35236 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.87■□□□□ 0.93
PTPN7P35236 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN7P35236 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN7P35236 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN7P35236 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.87■□□□□ 0.93
PTPN7P35236 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
PTPN7P35236 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN7P35236 PTBP1P-201ENST00000554374 1601 ntBASIC20.86■□□□□ 0.93
PTPN7P35236 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN7P35236 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN7P35236 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN7P35236 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN7P35236 CNN2P6-201ENST00000439038 900 ntBASIC20.86■□□□□ 0.93
PTPN7P35236 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.86■□□□□ 0.93
PTPN7P35236 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PTPN7P35236 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PTPN7P35236 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN7P35236 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.86■□□□□ 0.93
PTPN7P35236 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN7P35236 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN7P35236 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.85■□□□□ 0.93
PTPN7P35236 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PTPN7P35236 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.85■□□□□ 0.93
PTPN7P35236 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.85■□□□□ 0.93
PTPN7P35236 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN7P35236 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN7P35236 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN7P35236 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.85■□□□□ 0.93
PTPN7P35236 MCRIP2P1-201ENST00000394346 511 ntBASIC20.85■□□□□ 0.93
PTPN7P35236 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.85■□□□□ 0.93
PTPN7P35236 DUX4L16-201ENST00000555130 1264 ntBASIC20.85■□□□□ 0.93
PTPN7P35236 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.85■□□□□ 0.93
PTPN7P35236 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.85■□□□□ 0.93
PTPN7P35236 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.85■□□□□ 0.93
PTPN7P35236 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PTPN7P35236 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN7P35236 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PTPN7P35236 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.85■□□□□ 0.93
PTPN7P35236 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PTPN7P35236 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN7P35236 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.84■□□□□ 0.93
PTPN7P35236 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN7P35236 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN7P35236 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN7P35236 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN7P35236 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.84■□□□□ 0.93
PTPN7P35236 AC006015.1-201ENST00000429970 570 ntBASIC20.84■□□□□ 0.93
PTPN7P35236 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN7P35236 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN7P35236 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.84■□□□□ 0.93
PTPN7P35236 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN7P35236 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.84■□□□□ 0.93
PTPN7P35236 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN7P35236 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN7P35236 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.84■□□□□ 0.93
PTPN7P35236 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN7P35236 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN7P35236 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.84■□□□□ 0.93
PTPN7P35236 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN7P35236 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.84■□□□□ 0.93
PTPN7P35236 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PTPN7P35236 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.84■□□□□ 0.93
PTPN7P35236 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.84■□□□□ 0.93
PTPN7P35236 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN7P35236 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN7P35236 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN7P35236 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN7P35236 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN7P35236 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.83■□□□□ 0.93
PTPN7P35236 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN7P35236 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN7P35236 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.83■□□□□ 0.93
PTPN7P35236 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.83■□□□□ 0.93
PTPN7P35236 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.83■□□□□ 0.93
PTPN7P35236 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.83■□□□□ 0.93
PTPN7P35236 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PTPN7P35236 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN7P35236 AC068338.2-201ENST00000563278 1430 ntBASIC20.83■□□□□ 0.93
PTPN7P35236 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PTPN7P35236 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PTPN7P35236 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.83■□□□□ 0.92
PTPN7P35236 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.83■□□□□ 0.92
PTPN7P35236 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms