Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
RPS4Y1P22090 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.51■□□□□ 0.55
RPS4Y1P22090 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.51■□□□□ 0.55
RPS4Y1P22090 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.51■□□□□ 0.55
RPS4Y1P22090 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4Y1P22090 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4Y1P22090 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.51■□□□□ 0.55
RPS4Y1P22090 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4Y1P22090 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4Y1P22090 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4Y1P22090 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
RPS4Y1P22090 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RPS4Y1P22090 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
RPS4Y1P22090 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPS4Y1P22090 AL691432.2-201ENST00000607222 2038 ntBASIC18.5■□□□□ 0.55
RPS4Y1P22090 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPS4Y1P22090 PCDHAC2-203ENST00000615316 3011 ntBASIC18.5■□□□□ 0.55
RPS4Y1P22090 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPS4Y1P22090 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.5■□□□□ 0.55
RPS4Y1P22090 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.5■□□□□ 0.55
RPS4Y1P22090 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
RPS4Y1P22090 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.5■□□□□ 0.55
RPS4Y1P22090 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPS4Y1P22090 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
RPS4Y1P22090 AL355472.2-201ENST00000422958 438 ntBASIC18.5■□□□□ 0.55
RPS4Y1P22090 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
RPS4Y1P22090 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.5■□□□□ 0.55
RPS4Y1P22090 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.5■□□□□ 0.55
RPS4Y1P22090 AC005181.1-201ENST00000604782 1256 ntBASIC18.5■□□□□ 0.55
RPS4Y1P22090 IKBKGP1-201ENST00000612193 1073 ntBASIC18.5■□□□□ 0.55
RPS4Y1P22090 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.5■□□□□ 0.55
RPS4Y1P22090 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.5■□□□□ 0.55
RPS4Y1P22090 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.5■□□□□ 0.55
RPS4Y1P22090 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RPS4Y1P22090 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPS4Y1P22090 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RPS4Y1P22090 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RPS4Y1P22090 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4Y1P22090 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4Y1P22090 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4Y1P22090 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4Y1P22090 AC093787.1-201ENST00000450396 207 ntBASIC18.49■□□□□ 0.55
RPS4Y1P22090 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4Y1P22090 AC073111.5-205ENST00000641717 521 ntBASIC18.49■□□□□ 0.55
RPS4Y1P22090 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.49■□□□□ 0.55
RPS4Y1P22090 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4Y1P22090 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.49■□□□□ 0.55
RPS4Y1P22090 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4Y1P22090 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4Y1P22090 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4Y1P22090 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.49■□□□□ 0.55
RPS4Y1P22090 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4Y1P22090 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4Y1P22090 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y1P22090 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y1P22090 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.48■□□□□ 0.55
RPS4Y1P22090 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y1P22090 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y1P22090 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y1P22090 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y1P22090 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.48■□□□□ 0.55
RPS4Y1P22090 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y1P22090 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y1P22090 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.48■□□□□ 0.55
RPS4Y1P22090 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y1P22090 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.48■□□□□ 0.55
RPS4Y1P22090 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RPS4Y1P22090 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.48■□□□□ 0.55
RPS4Y1P22090 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.48■□□□□ 0.55
RPS4Y1P22090 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y1P22090 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.48■□□□□ 0.55
RPS4Y1P22090 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.48■□□□□ 0.55
RPS4Y1P22090 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.48■□□□□ 0.55
RPS4Y1P22090 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.48■□□□□ 0.55
RPS4Y1P22090 AC133552.2-202ENST00000575694 574 ntBASIC18.48■□□□□ 0.55
RPS4Y1P22090 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y1P22090 AC080038.1-201ENST00000611274 1154 ntBASIC18.48■□□□□ 0.55
RPS4Y1P22090 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y1P22090 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y1P22090 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.48■□□□□ 0.55
RPS4Y1P22090 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
RPS4Y1P22090 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.48■□□□□ 0.55
RPS4Y1P22090 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y1P22090 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.48■□□□□ 0.55
RPS4Y1P22090 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y1P22090 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y1P22090 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y1P22090 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.48■□□□□ 0.55
RPS4Y1P22090 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.48■□□□□ 0.55
RPS4Y1P22090 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.48■□□□□ 0.55
RPS4Y1P22090 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.48■□□□□ 0.55
RPS4Y1P22090 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y1P22090 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y1P22090 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y1P22090 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RPS4Y1P22090 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4Y1P22090 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RPS4Y1P22090 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4Y1P22090 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4Y1P22090 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms