Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-DQB2P05538 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-DQB2P05538 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
HLA-DQB2P05538 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
HLA-DQB2P05538 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HLA-DQB2P05538 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.5■□□□□ 0.87
HLA-DQB2P05538 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DQB2P05538 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DQB2P05538 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DQB2P05538 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
HLA-DQB2P05538 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
HLA-DQB2P05538 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DQB2P05538 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DQB2P05538 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.49■□□□□ 0.87
HLA-DQB2P05538 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.49■□□□□ 0.87
HLA-DQB2P05538 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
HLA-DQB2P05538 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.49■□□□□ 0.87
HLA-DQB2P05538 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
HLA-DQB2P05538 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.49■□□□□ 0.87
HLA-DQB2P05538 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.49■□□□□ 0.87
HLA-DQB2P05538 AC098934.4-201ENST00000564127 592 ntBASIC20.49■□□□□ 0.87
HLA-DQB2P05538 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.49■□□□□ 0.87
HLA-DQB2P05538 AC092118.2-201ENST00000613495 667 ntBASIC20.49■□□□□ 0.87
HLA-DQB2P05538 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DQB2P05538 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DQB2P05538 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.49■□□□□ 0.87
HLA-DQB2P05538 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
HLA-DQB2P05538 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DQB2P05538 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.48■□□□□ 0.87
HLA-DQB2P05538 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.48■□□□□ 0.87
HLA-DQB2P05538 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DQB2P05538 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.48■□□□□ 0.87
HLA-DQB2P05538 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.48■□□□□ 0.87
HLA-DQB2P05538 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DQB2P05538 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DQB2P05538 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.48■□□□□ 0.87
HLA-DQB2P05538 DUSP5P2-201ENST00000426873 1033 ntBASIC20.48■□□□□ 0.87
HLA-DQB2P05538 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.48■□□□□ 0.87
HLA-DQB2P05538 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DQB2P05538 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.48■□□□□ 0.87
HLA-DQB2P05538 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DQB2P05538 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
HLA-DQB2P05538 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DQB2P05538 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.48■□□□□ 0.87
HLA-DQB2P05538 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DQB2P05538 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DQB2P05538 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
HLA-DQB2P05538 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DQB2P05538 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.47■□□□□ 0.87
HLA-DQB2P05538 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DQB2P05538 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.47■□□□□ 0.87
HLA-DQB2P05538 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.47■□□□□ 0.87
HLA-DQB2P05538 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DQB2P05538 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DQB2P05538 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DQB2P05538 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.47■□□□□ 0.87
HLA-DQB2P05538 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.47■□□□□ 0.87
HLA-DQB2P05538 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
HLA-DQB2P05538 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.47■□□□□ 0.87
HLA-DQB2P05538 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.47■□□□□ 0.87
HLA-DQB2P05538 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.47■□□□□ 0.87
HLA-DQB2P05538 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.47■□□□□ 0.87
HLA-DQB2P05538 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DQB2P05538 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DQB2P05538 AC112907.3-201ENST00000577781 2400 ntBASIC20.47■□□□□ 0.87
HLA-DQB2P05538 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
HLA-DQB2P05538 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
HLA-DQB2P05538 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DQB2P05538 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DQB2P05538 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.47■□□□□ 0.87
HLA-DQB2P05538 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
HLA-DQB2P05538 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
HLA-DQB2P05538 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
HLA-DQB2P05538 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DQB2P05538 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DQB2P05538 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DQB2P05538 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.46■□□□□ 0.87
HLA-DQB2P05538 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
HLA-DQB2P05538 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
HLA-DQB2P05538 HLA-L-209ENST00000420110 1011 ntBASIC20.46■□□□□ 0.87
HLA-DQB2P05538 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DQB2P05538 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.46■□□□□ 0.87
HLA-DQB2P05538 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DQB2P05538 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DQB2P05538 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.46■□□□□ 0.87
HLA-DQB2P05538 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.46■□□□□ 0.87
HLA-DQB2P05538 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DQB2P05538 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DQB2P05538 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DQB2P05538 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DQB2P05538 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DQB2P05538 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DQB2P05538 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DQB2P05538 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.46■□□□□ 0.87
HLA-DQB2P05538 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DQB2P05538 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.45■□□□□ 0.86
HLA-DQB2P05538 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DQB2P05538 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
HLA-DQB2P05538 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.45■□□□□ 0.86
HLA-DQB2P05538 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms