Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZIC3O60481 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZIC3O60481 AC073314.1-201ENST00000568729 2216 ntBASIC18.18■□□□□ 0.5
ZIC3O60481 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
ZIC3O60481 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZIC3O60481 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.18■□□□□ 0.5
ZIC3O60481 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZIC3O60481 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZIC3O60481 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ZIC3O60481 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.18■□□□□ 0.5
ZIC3O60481 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZIC3O60481 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.18■□□□□ 0.5
ZIC3O60481 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZIC3O60481 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.18■□□□□ 0.5
ZIC3O60481 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.18■□□□□ 0.5
ZIC3O60481 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.18■□□□□ 0.5
ZIC3O60481 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZIC3O60481 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ZIC3O60481 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.18■□□□□ 0.5
ZIC3O60481 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZIC3O60481 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZIC3O60481 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZIC3O60481 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.18■□□□□ 0.5
ZIC3O60481 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.18■□□□□ 0.5
ZIC3O60481 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZIC3O60481 AC020907.5-201ENST00000624372 1936 ntBASIC18.17■□□□□ 0.5
ZIC3O60481 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZIC3O60481 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZIC3O60481 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
ZIC3O60481 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.17■□□□□ 0.5
ZIC3O60481 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
ZIC3O60481 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZIC3O60481 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZIC3O60481 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZIC3O60481 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.17■□□□□ 0.5
ZIC3O60481 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.17■□□□□ 0.5
ZIC3O60481 AC120498.8-201ENST00000614275 531 ntBASIC18.17■□□□□ 0.5
ZIC3O60481 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZIC3O60481 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZIC3O60481 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZIC3O60481 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZIC3O60481 FEM1AP1-201ENST00000431297 1995 ntBASIC18.17■□□□□ 0.5
ZIC3O60481 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
ZIC3O60481 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZIC3O60481 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZIC3O60481 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ZIC3O60481 KRT8P17-201ENST00000453110 1448 ntBASIC18.16■□□□□ 0.5
ZIC3O60481 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZIC3O60481 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZIC3O60481 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZIC3O60481 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZIC3O60481 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZIC3O60481 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.16■□□□□ 0.5
ZIC3O60481 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.16■□□□□ 0.5
ZIC3O60481 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ZIC3O60481 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.16■□□□□ 0.5
ZIC3O60481 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.16■□□□□ 0.5
ZIC3O60481 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.16■□□□□ 0.5
ZIC3O60481 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.16■□□□□ 0.5
ZIC3O60481 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZIC3O60481 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.16■□□□□ 0.5
ZIC3O60481 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.16■□□□□ 0.5
ZIC3O60481 ITM2C-210ENST00000620962 501 ntBASIC18.16■□□□□ 0.5
ZIC3O60481 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.16■□□□□ 0.5
ZIC3O60481 TMEM191A-211ENST00000637163 1067 ntBASIC18.16■□□□□ 0.5
ZIC3O60481 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZIC3O60481 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZIC3O60481 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZIC3O60481 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.16■□□□□ 0.5
ZIC3O60481 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.16■□□□□ 0.5
ZIC3O60481 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZIC3O60481 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZIC3O60481 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZIC3O60481 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZIC3O60481 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZIC3O60481 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZIC3O60481 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZIC3O60481 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZIC3O60481 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZIC3O60481 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZIC3O60481 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.15■□□□□ 0.5
ZIC3O60481 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ZIC3O60481 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.15■□□□□ 0.5
ZIC3O60481 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.15■□□□□ 0.5
ZIC3O60481 AC008687.6-201ENST00000596318 630 ntBASIC18.15■□□□□ 0.5
ZIC3O60481 AC006058.3-201ENST00000606217 1069 ntBASIC18.15■□□□□ 0.5
ZIC3O60481 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.15■□□□□ 0.5
ZIC3O60481 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZIC3O60481 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZIC3O60481 AP005212.1-201ENST00000581547 1997 ntBASIC18.15■□□□□ 0.5
ZIC3O60481 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZIC3O60481 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ZIC3O60481 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZIC3O60481 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZIC3O60481 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZIC3O60481 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZIC3O60481 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ZIC3O60481 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.14■□□□□ 0.5
ZIC3O60481 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
ZIC3O60481 SMG8-203ENST00000578922 2178 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms