Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 LINC01006-201ENST00000333319 2292 ntBASIC19.4■□□□□ 0.7
SLC28A2O43868 AC073130.3-201ENST00000624389 2278 ntBASIC19.4■□□□□ 0.7
SLC28A2O43868 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SLC28A2O43868 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.4■□□□□ 0.7
SLC28A2O43868 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.39■□□□□ 0.7
SLC28A2O43868 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC28A2O43868 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC28A2O43868 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC28A2O43868 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC28A2O43868 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC28A2O43868 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC28A2O43868 C1QBPP2-201ENST00000528754 825 ntBASIC19.39■□□□□ 0.69
SLC28A2O43868 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.39■□□□□ 0.69
SLC28A2O43868 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC28A2O43868 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.39■□□□□ 0.69
SLC28A2O43868 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC28A2O43868 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC28A2O43868 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC28A2O43868 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC28A2O43868 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
SLC28A2O43868 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
SLC28A2O43868 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SLC28A2O43868 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SLC28A2O43868 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC28A2O43868 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC28A2O43868 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC28A2O43868 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC28A2O43868 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC28A2O43868 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC28A2O43868 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SLC28A2O43868 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC28A2O43868 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SLC28A2O43868 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC28A2O43868 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC28A2O43868 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC28A2O43868 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC28A2O43868 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC28A2O43868 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC28A2O43868 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.38■□□□□ 0.69
SLC28A2O43868 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC28A2O43868 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC28A2O43868 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC28A2O43868 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
SLC28A2O43868 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC28A2O43868 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.38■□□□□ 0.69
SLC28A2O43868 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC28A2O43868 RPPH1-201ENST00000516869 333 ntBASIC19.38■□□□□ 0.69
SLC28A2O43868 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC28A2O43868 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.38■□□□□ 0.69
SLC28A2O43868 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC28A2O43868 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC28A2O43868 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.38■□□□□ 0.69
SLC28A2O43868 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC28A2O43868 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC28A2O43868 Z99916.2-201ENST00000604037 246 ntBASIC19.38■□□□□ 0.69
SLC28A2O43868 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
SLC28A2O43868 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC28A2O43868 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC28A2O43868 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC28A2O43868 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC28A2O43868 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
SLC28A2O43868 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC28A2O43868 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC28A2O43868 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC28A2O43868 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC28A2O43868 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC28A2O43868 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC28A2O43868 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC28A2O43868 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC28A2O43868 AC061975.6-201ENST00000579045 1553 ntBASIC19.37■□□□□ 0.69
SLC28A2O43868 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC28A2O43868 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SLC28A2O43868 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SLC28A2O43868 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC28A2O43868 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.37■□□□□ 0.69
SLC28A2O43868 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC28A2O43868 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.37■□□□□ 0.69
SLC28A2O43868 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.37■□□□□ 0.69
SLC28A2O43868 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.37■□□□□ 0.69
SLC28A2O43868 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC28A2O43868 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC28A2O43868 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC28A2O43868 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SLC28A2O43868 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SLC28A2O43868 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC28A2O43868 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC28A2O43868 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC28A2O43868 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC28A2O43868 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC28A2O43868 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC28A2O43868 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC28A2O43868 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
SLC28A2O43868 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC28A2O43868 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC28A2O43868 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SLC28A2O43868 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC28A2O43868 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.36■□□□□ 0.69
SLC28A2O43868 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC28A2O43868 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC28A2O43868 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms