Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PROM1O43490 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PROM1O43490 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.14■□□□□ 0.66
PROM1O43490 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PROM1O43490 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PROM1O43490 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PROM1O43490 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PROM1O43490 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.14■□□□□ 0.65
PROM1O43490 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.14■□□□□ 0.65
PROM1O43490 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.14■□□□□ 0.65
PROM1O43490 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.14■□□□□ 0.65
PROM1O43490 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PROM1O43490 AL589743.5-201ENST00000616611 1050 ntBASIC19.14■□□□□ 0.65
PROM1O43490 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PROM1O43490 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PROM1O43490 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PROM1O43490 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PROM1O43490 KRT17P1-201ENST00000399211 1546 ntBASIC19.14■□□□□ 0.65
PROM1O43490 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.14■□□□□ 0.65
PROM1O43490 AL162377.1-201ENST00000618844 1793 ntBASIC19.14■□□□□ 0.65
PROM1O43490 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PROM1O43490 AL512408.1-201ENST00000569378 2000 ntBASIC19.13■□□□□ 0.65
PROM1O43490 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.13■□□□□ 0.65
PROM1O43490 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PROM1O43490 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.13■□□□□ 0.65
PROM1O43490 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.13■□□□□ 0.65
PROM1O43490 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.13■□□□□ 0.65
PROM1O43490 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PROM1O43490 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PROM1O43490 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.13■□□□□ 0.65
PROM1O43490 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PROM1O43490 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PROM1O43490 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PROM1O43490 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PROM1O43490 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.13■□□□□ 0.65
PROM1O43490 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
PROM1O43490 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PROM1O43490 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
PROM1O43490 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PROM1O43490 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
PROM1O43490 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PROM1O43490 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PROM1O43490 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PROM1O43490 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.12■□□□□ 0.65
PROM1O43490 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.12■□□□□ 0.65
PROM1O43490 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.12■□□□□ 0.65
PROM1O43490 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PROM1O43490 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PROM1O43490 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PROM1O43490 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PROM1O43490 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PROM1O43490 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PROM1O43490 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.12■□□□□ 0.65
PROM1O43490 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.12■□□□□ 0.65
PROM1O43490 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.12■□□□□ 0.65
PROM1O43490 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PROM1O43490 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PROM1O43490 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PROM1O43490 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.12■□□□□ 0.65
PROM1O43490 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PROM1O43490 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.12■□□□□ 0.65
PROM1O43490 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.11■□□□□ 0.65
PROM1O43490 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.11■□□□□ 0.65
PROM1O43490 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PROM1O43490 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PROM1O43490 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PROM1O43490 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PROM1O43490 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.11■□□□□ 0.65
PROM1O43490 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.11■□□□□ 0.65
PROM1O43490 GPX1P1-201ENST00000388829 606 ntBASIC19.11■□□□□ 0.65
PROM1O43490 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PROM1O43490 BX276092.2-201ENST00000417668 665 ntBASIC19.11■□□□□ 0.65
PROM1O43490 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.11■□□□□ 0.65
PROM1O43490 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.11■□□□□ 0.65
PROM1O43490 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.11■□□□□ 0.65
PROM1O43490 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PROM1O43490 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PROM1O43490 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PROM1O43490 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PROM1O43490 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PROM1O43490 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PROM1O43490 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.11■□□□□ 0.65
PROM1O43490 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PROM1O43490 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PROM1O43490 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PROM1O43490 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PROM1O43490 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.1■□□□□ 0.65
PROM1O43490 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PROM1O43490 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PROM1O43490 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
PROM1O43490 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
PROM1O43490 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
PROM1O43490 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PROM1O43490 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PROM1O43490 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PROM1O43490 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.1■□□□□ 0.65
PROM1O43490 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PROM1O43490 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PROM1O43490 LSM12P1-201ENST00000411836 588 ntBASIC19.1■□□□□ 0.65
PROM1O43490 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms