Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
CUX2O14529 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC34.86■■■■□ 3.17
CUX2O14529 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
CUX2O14529 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
CUX2O14529 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
CUX2O14529 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
CUX2O14529 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC34.85■■■■□ 3.17
CUX2O14529 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC34.85■■■■□ 3.17
CUX2O14529 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC34.84■■■■□ 3.17
CUX2O14529 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
CUX2O14529 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC34.84■■■■□ 3.17
CUX2O14529 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC34.84■■■■□ 3.17
CUX2O14529 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
CUX2O14529 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC34.84■■■■□ 3.17
CUX2O14529 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
CUX2O14529 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
CUX2O14529 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC34.84■■■■□ 3.17
CUX2O14529 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC34.84■■■■□ 3.17
CUX2O14529 AC008622.2-201ENST00000617006 1229 ntBASIC34.84■■■■□ 3.17
CUX2O14529 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC34.83■■■■□ 3.17
CUX2O14529 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
CUX2O14529 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC34.83■■■■□ 3.17
CUX2O14529 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
CUX2O14529 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
CUX2O14529 AL671277.2-201ENST00000458060 996 ntBASIC34.83■■■■□ 3.17
CUX2O14529 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC34.83■■■■□ 3.17
CUX2O14529 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC34.83■■■■□ 3.17
CUX2O14529 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC34.82■■■■□ 3.16
CUX2O14529 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
CUX2O14529 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC34.82■■■■□ 3.16
CUX2O14529 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC34.82■■■■□ 3.16
CUX2O14529 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC34.82■■■■□ 3.16
CUX2O14529 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC34.82■■■■□ 3.16
CUX2O14529 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC34.82■■■■□ 3.16
CUX2O14529 AC139530.3-201ENST00000620344 690 ntBASIC34.82■■■■□ 3.16
CUX2O14529 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
CUX2O14529 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC34.82■■■■□ 3.16
CUX2O14529 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC34.82■■■■□ 3.16
CUX2O14529 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC34.81■■■■□ 3.16
CUX2O14529 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
CUX2O14529 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
CUX2O14529 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
CUX2O14529 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
CUX2O14529 ATP5G2P1-201ENST00000433580 426 ntBASIC34.81■■■■□ 3.16
CUX2O14529 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC34.81■■■■□ 3.16
CUX2O14529 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC34.81■■■■□ 3.16
CUX2O14529 AC026271.3-201ENST00000571884 352 ntBASIC34.81■■■■□ 3.16
CUX2O14529 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC34.81■■■■□ 3.16
CUX2O14529 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC34.81■■■■□ 3.16
CUX2O14529 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
CUX2O14529 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC34.81■■■■□ 3.16
CUX2O14529 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC34.8■■■■□ 3.16
CUX2O14529 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
CUX2O14529 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
CUX2O14529 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
CUX2O14529 PGM5P4-201ENST00000421970 445 ntBASIC34.8■■■■□ 3.16
CUX2O14529 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC34.8■■■■□ 3.16
CUX2O14529 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC34.8■■■■□ 3.16
CUX2O14529 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC34.8■■■■□ 3.16
CUX2O14529 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
CUX2O14529 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC34.8■■■■□ 3.16
CUX2O14529 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC34.8■■■■□ 3.16
CUX2O14529 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC34.8■■■■□ 3.16
CUX2O14529 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC34.79■■■■□ 3.16
CUX2O14529 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC34.79■■■■□ 3.16
CUX2O14529 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
CUX2O14529 AC004870.1-201ENST00000315132 882 ntBASIC34.79■■■■□ 3.16
CUX2O14529 COX11P1-201ENST00000489116 835 ntBASIC34.79■■■■□ 3.16
CUX2O14529 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC34.79■■■■□ 3.16
CUX2O14529 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC34.79■■■■□ 3.16
CUX2O14529 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC34.79■■■■□ 3.16
CUX2O14529 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC34.79■■■■□ 3.16
CUX2O14529 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC34.79■■■■□ 3.16
CUX2O14529 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC34.78■■■■□ 3.16
CUX2O14529 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC34.78■■■■□ 3.16
CUX2O14529 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC34.78■■■■□ 3.16
CUX2O14529 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC34.78■■■■□ 3.16
CUX2O14529 AC026471.6-201ENST00000622954 1905 ntBASIC34.78■■■■□ 3.16
CUX2O14529 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
CUX2O14529 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC34.78■■■■□ 3.16
CUX2O14529 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
CUX2O14529 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
CUX2O14529 DAP-202ENST00000432074 1048 ntTSL 2 BASIC34.78■■■■□ 3.16
CUX2O14529 FAAHP1-202ENST00000446499 1238 ntBASIC34.78■■■■□ 3.16
CUX2O14529 AC111152.3-201ENST00000569699 673 ntBASIC34.78■■■■□ 3.16
CUX2O14529 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC34.77■■■■□ 3.16
CUX2O14529 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC34.77■■■■□ 3.16
CUX2O14529 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC34.77■■■■□ 3.16
CUX2O14529 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC34.77■■■■□ 3.16
CUX2O14529 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
CUX2O14529 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC34.76■■■■□ 3.16
CUX2O14529 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC34.76■■■■□ 3.16
CUX2O14529 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
CUX2O14529 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
CUX2O14529 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
CUX2O14529 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC34.76■■■■□ 3.15
CUX2O14529 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC34.76■■■■□ 3.15
CUX2O14529 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC34.76■■■■□ 3.15
CUX2O14529 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC34.76■■■■□ 3.15
CUX2O14529 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC34.76■■■■□ 3.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms