Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPAS1Q99742 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.41■□□□□ 0.54
NPAS1Q99742 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPAS1Q99742 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPAS1Q99742 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NPAS1Q99742 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPAS1Q99742 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.41■□□□□ 0.54
NPAS1Q99742 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.41■□□□□ 0.54
NPAS1Q99742 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPAS1Q99742 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NPAS1Q99742 LSM12P1-201ENST00000411836 588 ntBASIC18.41■□□□□ 0.54
NPAS1Q99742 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NPAS1Q99742 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.41■□□□□ 0.54
NPAS1Q99742 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.41■□□□□ 0.54
NPAS1Q99742 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.41■□□□□ 0.54
NPAS1Q99742 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPAS1Q99742 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPAS1Q99742 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPAS1Q99742 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPAS1Q99742 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
NPAS1Q99742 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPAS1Q99742 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPAS1Q99742 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NPAS1Q99742 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.4■□□□□ 0.54
NPAS1Q99742 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPAS1Q99742 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPAS1Q99742 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NPAS1Q99742 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.4■□□□□ 0.54
NPAS1Q99742 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NPAS1Q99742 DUSP5P2-201ENST00000426873 1033 ntBASIC18.4■□□□□ 0.54
NPAS1Q99742 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NPAS1Q99742 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPAS1Q99742 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NPAS1Q99742 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPAS1Q99742 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.4■□□□□ 0.54
NPAS1Q99742 AP005212.1-201ENST00000581547 1997 ntBASIC18.4■□□□□ 0.54
NPAS1Q99742 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPAS1Q99742 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.4■□□□□ 0.54
NPAS1Q99742 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.4■□□□□ 0.54
NPAS1Q99742 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.4■□□□□ 0.54
NPAS1Q99742 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.4■□□□□ 0.54
NPAS1Q99742 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NPAS1Q99742 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NPAS1Q99742 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.39■□□□□ 0.54
NPAS1Q99742 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.39■□□□□ 0.53
NPAS1Q99742 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.39■□□□□ 0.53
NPAS1Q99742 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NPAS1Q99742 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.39■□□□□ 0.53
NPAS1Q99742 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.39■□□□□ 0.53
NPAS1Q99742 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.39■□□□□ 0.53
NPAS1Q99742 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.39■□□□□ 0.53
NPAS1Q99742 AC092118.2-201ENST00000613495 667 ntBASIC18.39■□□□□ 0.53
NPAS1Q99742 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NPAS1Q99742 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.39■□□□□ 0.53
NPAS1Q99742 AC007952.6-201ENST00000573168 2673 ntBASIC18.39■□□□□ 0.53
NPAS1Q99742 AC003957.1-201ENST00000625108 2673 ntBASIC18.39■□□□□ 0.53
NPAS1Q99742 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.38■□□□□ 0.53
NPAS1Q99742 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS1Q99742 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.38■□□□□ 0.53
NPAS1Q99742 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS1Q99742 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NPAS1Q99742 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.38■□□□□ 0.53
NPAS1Q99742 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.38■□□□□ 0.53
NPAS1Q99742 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.38■□□□□ 0.53
NPAS1Q99742 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.38■□□□□ 0.53
NPAS1Q99742 AL589743.5-201ENST00000616611 1050 ntBASIC18.38■□□□□ 0.53
NPAS1Q99742 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS1Q99742 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS1Q99742 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.38■□□□□ 0.53
NPAS1Q99742 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS1Q99742 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.38■□□□□ 0.53
NPAS1Q99742 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.38■□□□□ 0.53
NPAS1Q99742 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS1Q99742 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS1Q99742 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NPAS1Q99742 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS1Q99742 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS1Q99742 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.37■□□□□ 0.53
NPAS1Q99742 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.37■□□□□ 0.53
NPAS1Q99742 AC069152.1-201ENST00000438030 544 ntBASIC18.37■□□□□ 0.53
NPAS1Q99742 AC091874.3-201ENST00000512672 1195 ntBASIC18.37■□□□□ 0.53
NPAS1Q99742 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.37■□□□□ 0.53
NPAS1Q99742 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.37■□□□□ 0.53
NPAS1Q99742 MYC-209ENST00000641252 345 ntBASIC18.37■□□□□ 0.53
NPAS1Q99742 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.37■□□□□ 0.53
NPAS1Q99742 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS1Q99742 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS1Q99742 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS1Q99742 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS1Q99742 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.37■□□□□ 0.53
NPAS1Q99742 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
NPAS1Q99742 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS1Q99742 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NPAS1Q99742 AC020907.5-201ENST00000624372 1936 ntBASIC18.37■□□□□ 0.53
NPAS1Q99742 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS1Q99742 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NPAS1Q99742 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
NPAS1Q99742 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.37■□□□□ 0.53
NPAS1Q99742 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS1Q99742 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms