Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDK5RAP1Q96SZ6 AC008687.6-201ENST00000596318 630 ntBASIC21.02■□□□□ 0.96
CDK5RAP1Q96SZ6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CDK5RAP1Q96SZ6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDK5RAP1Q96SZ6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.01■□□□□ 0.95
CDK5RAP1Q96SZ6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDK5RAP1Q96SZ6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CDK5RAP1Q96SZ6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
CDK5RAP1Q96SZ6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDK5RAP1Q96SZ6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDK5RAP1Q96SZ6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.01■□□□□ 0.95
CDK5RAP1Q96SZ6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDK5RAP1Q96SZ6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CDK5RAP1Q96SZ6 HLA-G-202ENST00000376815 851 ntBASIC21.01■□□□□ 0.95
CDK5RAP1Q96SZ6 HLA-G-203ENST00000376818 1127 ntBASIC21.01■□□□□ 0.95
CDK5RAP1Q96SZ6 POM121L13P-201ENST00000422362 380 ntBASIC21.01■□□□□ 0.95
CDK5RAP1Q96SZ6 AC128676.1-201ENST00000454392 318 ntBASIC21.01■□□□□ 0.95
CDK5RAP1Q96SZ6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDK5RAP1Q96SZ6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDK5RAP1Q96SZ6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.01■□□□□ 0.95
CDK5RAP1Q96SZ6 AC005229.4-201ENST00000610085 2198 ntBASIC21.01■□□□□ 0.95
CDK5RAP1Q96SZ6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.01■□□□□ 0.95
CDK5RAP1Q96SZ6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDK5RAP1Q96SZ6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDK5RAP1Q96SZ6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDK5RAP1Q96SZ6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDK5RAP1Q96SZ6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDK5RAP1Q96SZ6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21■□□□□ 0.95
CDK5RAP1Q96SZ6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDK5RAP1Q96SZ6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDK5RAP1Q96SZ6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDK5RAP1Q96SZ6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
CDK5RAP1Q96SZ6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDK5RAP1Q96SZ6 AL121603.2-201ENST00000557373 2117 ntBASIC21■□□□□ 0.95
CDK5RAP1Q96SZ6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CDK5RAP1Q96SZ6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21■□□□□ 0.95
CDK5RAP1Q96SZ6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21■□□□□ 0.95
CDK5RAP1Q96SZ6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDK5RAP1Q96SZ6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CDK5RAP1Q96SZ6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDK5RAP1Q96SZ6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDK5RAP1Q96SZ6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CDK5RAP1Q96SZ6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CDK5RAP1Q96SZ6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDK5RAP1Q96SZ6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21■□□□□ 0.95
CDK5RAP1Q96SZ6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDK5RAP1Q96SZ6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDK5RAP1Q96SZ6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDK5RAP1Q96SZ6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDK5RAP1Q96SZ6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.99■□□□□ 0.95
CDK5RAP1Q96SZ6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDK5RAP1Q96SZ6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDK5RAP1Q96SZ6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.99■□□□□ 0.95
CDK5RAP1Q96SZ6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDK5RAP1Q96SZ6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CDK5RAP1Q96SZ6 AC073648.6-201ENST00000641589 218 ntBASIC20.99■□□□□ 0.95
CDK5RAP1Q96SZ6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
CDK5RAP1Q96SZ6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDK5RAP1Q96SZ6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CDK5RAP1Q96SZ6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.99■□□□□ 0.95
CDK5RAP1Q96SZ6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDK5RAP1Q96SZ6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.98■□□□□ 0.95
CDK5RAP1Q96SZ6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK5RAP1Q96SZ6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDK5RAP1Q96SZ6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK5RAP1Q96SZ6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK5RAP1Q96SZ6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK5RAP1Q96SZ6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.98■□□□□ 0.95
CDK5RAP1Q96SZ6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CDK5RAP1Q96SZ6 PRORSD1P-201ENST00000295112 541 ntBASIC20.98■□□□□ 0.95
CDK5RAP1Q96SZ6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK5RAP1Q96SZ6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.98■□□□□ 0.95
CDK5RAP1Q96SZ6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.98■□□□□ 0.95
CDK5RAP1Q96SZ6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDK5RAP1Q96SZ6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.98■□□□□ 0.95
CDK5RAP1Q96SZ6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.98■□□□□ 0.95
CDK5RAP1Q96SZ6 AC120498.8-201ENST00000614275 531 ntBASIC20.98■□□□□ 0.95
CDK5RAP1Q96SZ6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK5RAP1Q96SZ6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDK5RAP1Q96SZ6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK5RAP1Q96SZ6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK5RAP1Q96SZ6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDK5RAP1Q96SZ6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDK5RAP1Q96SZ6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.97■□□□□ 0.95
CDK5RAP1Q96SZ6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.97■□□□□ 0.95
CDK5RAP1Q96SZ6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.97■□□□□ 0.95
CDK5RAP1Q96SZ6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.97■□□□□ 0.95
CDK5RAP1Q96SZ6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.97■□□□□ 0.95
CDK5RAP1Q96SZ6 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.97■□□□□ 0.95
CDK5RAP1Q96SZ6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK5RAP1Q96SZ6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDK5RAP1Q96SZ6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK5RAP1Q96SZ6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDK5RAP1Q96SZ6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDK5RAP1Q96SZ6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK5RAP1Q96SZ6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDK5RAP1Q96SZ6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.97■□□□□ 0.95
CDK5RAP1Q96SZ6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.97■□□□□ 0.95
CDK5RAP1Q96SZ6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.97■□□□□ 0.95
CDK5RAP1Q96SZ6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms