Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC39Q96DD0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC39Q96DD0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC39Q96DD0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC39Q96DD0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC39Q96DD0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC39Q96DD0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC39Q96DD0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.41■□□□□ 0.86
LRRC39Q96DD0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
LRRC39Q96DD0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC39Q96DD0 UBE2DNL-204ENST00000602536 740 ntBASIC20.41■□□□□ 0.86
LRRC39Q96DD0 MYCNOS-205ENST00000641950 531 ntBASIC20.41■□□□□ 0.86
LRRC39Q96DD0 AC087633.2-202ENST00000565166 1439 ntBASIC20.41■□□□□ 0.86
LRRC39Q96DD0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC39Q96DD0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC39Q96DD0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC39Q96DD0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.41■□□□□ 0.86
LRRC39Q96DD0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC39Q96DD0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.41■□□□□ 0.86
LRRC39Q96DD0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC39Q96DD0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC39Q96DD0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC39Q96DD0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC39Q96DD0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC39Q96DD0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
LRRC39Q96DD0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC39Q96DD0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC39Q96DD0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC39Q96DD0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
LRRC39Q96DD0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC39Q96DD0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.4■□□□□ 0.86
LRRC39Q96DD0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LRRC39Q96DD0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC39Q96DD0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC39Q96DD0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.4■□□□□ 0.86
LRRC39Q96DD0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC39Q96DD0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.4■□□□□ 0.86
LRRC39Q96DD0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.4■□□□□ 0.86
LRRC39Q96DD0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC39Q96DD0 AL356652.1-201ENST00000615962 565 ntBASIC20.4■□□□□ 0.86
LRRC39Q96DD0 AC125437.2-201ENST00000625180 2167 ntBASIC20.4■□□□□ 0.86
LRRC39Q96DD0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.4■□□□□ 0.86
LRRC39Q96DD0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.39■□□□□ 0.86
LRRC39Q96DD0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRRC39Q96DD0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRRC39Q96DD0 AL691432.2-201ENST00000607222 2038 ntBASIC20.39■□□□□ 0.86
LRRC39Q96DD0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.39■□□□□ 0.86
LRRC39Q96DD0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
LRRC39Q96DD0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.39■□□□□ 0.86
LRRC39Q96DD0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
LRRC39Q96DD0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
LRRC39Q96DD0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC39Q96DD0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC39Q96DD0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC39Q96DD0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC39Q96DD0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC39Q96DD0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.39■□□□□ 0.85
LRRC39Q96DD0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC39Q96DD0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
LRRC39Q96DD0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.39■□□□□ 0.85
LRRC39Q96DD0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
LRRC39Q96DD0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.39■□□□□ 0.85
LRRC39Q96DD0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC39Q96DD0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.39■□□□□ 0.85
LRRC39Q96DD0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC39Q96DD0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
LRRC39Q96DD0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
LRRC39Q96DD0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC39Q96DD0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC39Q96DD0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC39Q96DD0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.38■□□□□ 0.85
LRRC39Q96DD0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
LRRC39Q96DD0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC39Q96DD0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC39Q96DD0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC39Q96DD0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.38■□□□□ 0.85
LRRC39Q96DD0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC39Q96DD0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC39Q96DD0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.38■□□□□ 0.85
LRRC39Q96DD0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
LRRC39Q96DD0 AL162412.1-201ENST00000567129 965 ntBASIC20.38■□□□□ 0.85
LRRC39Q96DD0 KRT18P61-201ENST00000585825 1298 ntBASIC20.38■□□□□ 0.85
LRRC39Q96DD0 AL591742.1-201ENST00000604433 565 ntBASIC20.38■□□□□ 0.85
LRRC39Q96DD0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC39Q96DD0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
LRRC39Q96DD0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.38■□□□□ 0.85
LRRC39Q96DD0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC39Q96DD0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC39Q96DD0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.38■□□□□ 0.85
LRRC39Q96DD0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC39Q96DD0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC39Q96DD0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC39Q96DD0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
LRRC39Q96DD0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC39Q96DD0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC39Q96DD0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC39Q96DD0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.37■□□□□ 0.85
LRRC39Q96DD0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC39Q96DD0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.37■□□□□ 0.85
LRRC39Q96DD0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms