Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHD5Q8TDI0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHD5Q8TDI0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHD5Q8TDI0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHD5Q8TDI0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.52■□□□□ 0.88
CHD5Q8TDI0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CHD5Q8TDI0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.52■□□□□ 0.88
CHD5Q8TDI0 AC069544.1-201ENST00000609399 999 ntBASIC20.52■□□□□ 0.88
CHD5Q8TDI0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHD5Q8TDI0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHD5Q8TDI0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHD5Q8TDI0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.52■□□□□ 0.88
CHD5Q8TDI0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHD5Q8TDI0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHD5Q8TDI0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHD5Q8TDI0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHD5Q8TDI0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CHD5Q8TDI0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CHD5Q8TDI0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CHD5Q8TDI0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
CHD5Q8TDI0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.52■□□□□ 0.87
CHD5Q8TDI0 AL031963.3-201ENST00000606441 850 ntBASIC20.52■□□□□ 0.87
CHD5Q8TDI0 DPP3P2-201ENST00000416030 1696 ntBASIC20.52■□□□□ 0.87
CHD5Q8TDI0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
CHD5Q8TDI0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CHD5Q8TDI0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHD5Q8TDI0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.51■□□□□ 0.87
CHD5Q8TDI0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.51■□□□□ 0.87
CHD5Q8TDI0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CHD5Q8TDI0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.51■□□□□ 0.87
CHD5Q8TDI0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CHD5Q8TDI0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHD5Q8TDI0 AL162377.1-201ENST00000618844 1793 ntBASIC20.51■□□□□ 0.87
CHD5Q8TDI0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHD5Q8TDI0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHD5Q8TDI0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHD5Q8TDI0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.51■□□□□ 0.87
CHD5Q8TDI0 AC026366.1-201ENST00000488803 879 ntBASIC20.51■□□□□ 0.87
CHD5Q8TDI0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.51■□□□□ 0.87
CHD5Q8TDI0 AC008687.6-201ENST00000596318 630 ntBASIC20.51■□□□□ 0.87
CHD5Q8TDI0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHD5Q8TDI0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHD5Q8TDI0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHD5Q8TDI0 AC020907.5-201ENST00000624372 1936 ntBASIC20.51■□□□□ 0.87
CHD5Q8TDI0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHD5Q8TDI0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.51■□□□□ 0.87
CHD5Q8TDI0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHD5Q8TDI0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHD5Q8TDI0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CHD5Q8TDI0 POU5F1P3-201ENST00000428824 1078 ntBASIC20.5■□□□□ 0.87
CHD5Q8TDI0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.5■□□□□ 0.87
CHD5Q8TDI0 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.5■□□□□ 0.87
CHD5Q8TDI0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.5■□□□□ 0.87
CHD5Q8TDI0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.5■□□□□ 0.87
CHD5Q8TDI0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.5■□□□□ 0.87
CHD5Q8TDI0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHD5Q8TDI0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CHD5Q8TDI0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHD5Q8TDI0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CHD5Q8TDI0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHD5Q8TDI0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.5■□□□□ 0.87
CHD5Q8TDI0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHD5Q8TDI0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.5■□□□□ 0.87
CHD5Q8TDI0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHD5Q8TDI0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.5■□□□□ 0.87
CHD5Q8TDI0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.5■□□□□ 0.87
CHD5Q8TDI0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHD5Q8TDI0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHD5Q8TDI0 AL512408.1-201ENST00000569378 2000 ntBASIC20.49■□□□□ 0.87
CHD5Q8TDI0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHD5Q8TDI0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHD5Q8TDI0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.49■□□□□ 0.87
CHD5Q8TDI0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CHD5Q8TDI0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHD5Q8TDI0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHD5Q8TDI0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHD5Q8TDI0 BX119927.1-201ENST00000636596 1552 ntBASIC20.49■□□□□ 0.87
CHD5Q8TDI0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHD5Q8TDI0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.49■□□□□ 0.87
CHD5Q8TDI0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.49■□□□□ 0.87
CHD5Q8TDI0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.49■□□□□ 0.87
CHD5Q8TDI0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHD5Q8TDI0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHD5Q8TDI0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.49■□□□□ 0.87
CHD5Q8TDI0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHD5Q8TDI0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.49■□□□□ 0.87
CHD5Q8TDI0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHD5Q8TDI0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CHD5Q8TDI0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHD5Q8TDI0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.48■□□□□ 0.87
CHD5Q8TDI0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHD5Q8TDI0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.48■□□□□ 0.87
CHD5Q8TDI0 ITM2C-210ENST00000620962 501 ntBASIC20.48■□□□□ 0.87
CHD5Q8TDI0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHD5Q8TDI0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHD5Q8TDI0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHD5Q8TDI0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHD5Q8TDI0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.48■□□□□ 0.87
CHD5Q8TDI0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHD5Q8TDI0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms