Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXG1P55316 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXG1P55316 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXG1P55316 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.75■□□□□ 0.43
FOXG1P55316 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.75■□□□□ 0.43
FOXG1P55316 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
FOXG1P55316 PNMA6B-201ENST00000538162 1200 ntBASIC17.75■□□□□ 0.43
FOXG1P55316 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.75■□□□□ 0.43
FOXG1P55316 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXG1P55316 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXG1P55316 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXG1P55316 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXG1P55316 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXG1P55316 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXG1P55316 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXG1P55316 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXG1P55316 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXG1P55316 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXG1P55316 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXG1P55316 AC092720.2-201ENST00000602388 1665 ntBASIC17.74■□□□□ 0.43
FOXG1P55316 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXG1P55316 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.74■□□□□ 0.43
FOXG1P55316 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.74■□□□□ 0.43
FOXG1P55316 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXG1P55316 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXG1P55316 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXG1P55316 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXG1P55316 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXG1P55316 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXG1P55316 ABHD17AP1-201ENST00000358206 933 ntBASIC17.74■□□□□ 0.43
FOXG1P55316 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.74■□□□□ 0.43
FOXG1P55316 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.74■□□□□ 0.43
FOXG1P55316 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
FOXG1P55316 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXG1P55316 UNC93B5-201ENST00000530315 699 ntBASIC17.74■□□□□ 0.43
FOXG1P55316 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.74■□□□□ 0.43
FOXG1P55316 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXG1P55316 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXG1P55316 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXG1P55316 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.74■□□□□ 0.43
FOXG1P55316 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXG1P55316 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXG1P55316 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXG1P55316 DPP3P2-201ENST00000416030 1696 ntBASIC17.74■□□□□ 0.43
FOXG1P55316 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXG1P55316 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXG1P55316 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXG1P55316 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXG1P55316 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXG1P55316 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FOXG1P55316 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
FOXG1P55316 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.73■□□□□ 0.43
FOXG1P55316 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.73■□□□□ 0.43
FOXG1P55316 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.73■□□□□ 0.43
FOXG1P55316 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.73■□□□□ 0.43
FOXG1P55316 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
FOXG1P55316 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.73■□□□□ 0.43
FOXG1P55316 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.73■□□□□ 0.43
FOXG1P55316 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.73■□□□□ 0.43
FOXG1P55316 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXG1P55316 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
FOXG1P55316 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXG1P55316 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXG1P55316 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.73■□□□□ 0.43
FOXG1P55316 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.73■□□□□ 0.43
FOXG1P55316 FEM1AP1-201ENST00000431297 1995 ntBASIC17.73■□□□□ 0.43
FOXG1P55316 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXG1P55316 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.73■□□□□ 0.43
FOXG1P55316 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXG1P55316 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXG1P55316 PTBP1P-201ENST00000554374 1601 ntBASIC17.72■□□□□ 0.43
FOXG1P55316 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXG1P55316 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXG1P55316 SMG8-203ENST00000578922 2178 ntBASIC17.72■□□□□ 0.43
FOXG1P55316 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXG1P55316 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
FOXG1P55316 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXG1P55316 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.72■□□□□ 0.43
FOXG1P55316 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXG1P55316 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXG1P55316 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXG1P55316 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXG1P55316 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXG1P55316 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXG1P55316 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.72■□□□□ 0.43
FOXG1P55316 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.72■□□□□ 0.43
FOXG1P55316 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXG1P55316 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.72■□□□□ 0.43
FOXG1P55316 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXG1P55316 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXG1P55316 AC006557.6-201ENST00000623071 864 ntBASIC17.72■□□□□ 0.43
FOXG1P55316 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.72■□□□□ 0.43
FOXG1P55316 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXG1P55316 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXG1P55316 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXG1P55316 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.72■□□□□ 0.43
FOXG1P55316 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXG1P55316 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXG1P55316 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXG1P55316 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms