Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
CPT1AP50416 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CPT1AP50416 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CPT1AP50416 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CPT1AP50416 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC22.53■■□□□ 1.2
CPT1AP50416 AF186192.3-201ENST00000583427 947 ntBASIC22.53■■□□□ 1.2
CPT1AP50416 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CPT1AP50416 AC026471.5-201ENST00000615068 467 ntBASIC22.53■■□□□ 1.2
CPT1AP50416 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC22.53■■□□□ 1.2
CPT1AP50416 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CPT1AP50416 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CPT1AP50416 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CPT1AP50416 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.53■■□□□ 1.2
CPT1AP50416 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.53■■□□□ 1.2
CPT1AP50416 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CPT1AP50416 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.53■■□□□ 1.2
CPT1AP50416 HTR7P1-201ENST00000538670 1336 ntBASIC22.53■■□□□ 1.2
CPT1AP50416 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CPT1AP50416 Z98882.1-201ENST00000622160 2253 ntBASIC22.52■■□□□ 1.2
CPT1AP50416 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CPT1AP50416 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.52■■□□□ 1.2
CPT1AP50416 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CPT1AP50416 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.52■■□□□ 1.2
CPT1AP50416 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CPT1AP50416 SAPCD2P4-201ENST00000424595 1171 ntBASIC22.52■■□□□ 1.2
CPT1AP50416 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC22.52■■□□□ 1.2
CPT1AP50416 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CPT1AP50416 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.52■■□□□ 1.2
CPT1AP50416 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CPT1AP50416 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CPT1AP50416 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CPT1AP50416 AC124283.5-201ENST00000624661 1809 ntBASIC22.52■■□□□ 1.2
CPT1AP50416 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC22.52■■□□□ 1.2
CPT1AP50416 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CPT1AP50416 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CPT1AP50416 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CPT1AP50416 TREX2-204ENST00000370212 861 ntTSL 5 BASIC22.51■■□□□ 1.19
CPT1AP50416 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
CPT1AP50416 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC22.51■■□□□ 1.19
CPT1AP50416 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CPT1AP50416 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC22.51■■□□□ 1.19
CPT1AP50416 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.51■■□□□ 1.19
CPT1AP50416 RPS15-203ENST00000586096 570 ntTSL 2 BASIC22.51■■□□□ 1.19
CPT1AP50416 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CPT1AP50416 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22.51■■□□□ 1.19
CPT1AP50416 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CPT1AP50416 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
CPT1AP50416 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CPT1AP50416 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CPT1AP50416 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CPT1AP50416 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC22.5■■□□□ 1.19
CPT1AP50416 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CPT1AP50416 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
CPT1AP50416 KRT18P21-201ENST00000515767 1272 ntBASIC22.5■■□□□ 1.19
CPT1AP50416 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC22.5■■□□□ 1.19
CPT1AP50416 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC22.5■■□□□ 1.19
CPT1AP50416 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CPT1AP50416 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CPT1AP50416 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CPT1AP50416 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.5■■□□□ 1.19
CPT1AP50416 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CPT1AP50416 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CPT1AP50416 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
CPT1AP50416 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CPT1AP50416 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CPT1AP50416 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CPT1AP50416 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CPT1AP50416 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CPT1AP50416 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CPT1AP50416 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.49■■□□□ 1.19
CPT1AP50416 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
CPT1AP50416 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CPT1AP50416 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CPT1AP50416 AL355355.2-201ENST00000442321 338 ntBASIC22.49■■□□□ 1.19
CPT1AP50416 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC22.49■■□□□ 1.19
CPT1AP50416 AP003071.4-201ENST00000562276 1284 ntBASIC22.49■■□□□ 1.19
CPT1AP50416 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC22.49■■□□□ 1.19
CPT1AP50416 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CPT1AP50416 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CPT1AP50416 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.49■■□□□ 1.19
CPT1AP50416 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC22.49■■□□□ 1.19
CPT1AP50416 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CPT1AP50416 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.49■■□□□ 1.19
CPT1AP50416 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CPT1AP50416 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CPT1AP50416 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CPT1AP50416 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC22.48■■□□□ 1.19
CPT1AP50416 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CPT1AP50416 HLA-G-202ENST00000376815 851 ntBASIC22.48■■□□□ 1.19
CPT1AP50416 HLA-G-203ENST00000376818 1127 ntBASIC22.48■■□□□ 1.19
CPT1AP50416 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC22.48■■□□□ 1.19
CPT1AP50416 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC22.48■■□□□ 1.19
CPT1AP50416 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC22.48■■□□□ 1.19
CPT1AP50416 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
CPT1AP50416 GRAP-204ENST00000573099 846 ntTSL 3 BASIC22.48■■□□□ 1.19
CPT1AP50416 CD177P1-201ENST00000606252 935 ntBASIC22.48■■□□□ 1.19
CPT1AP50416 AC004264.1-201ENST00000608354 794 ntBASIC22.48■■□□□ 1.19
CPT1AP50416 AC097493.4-201ENST00000641197 219 ntBASIC22.48■■□□□ 1.19
CPT1AP50416 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
CPT1AP50416 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms