Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CSNK1A1P48729 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.98■□□□□ 0.47
CSNK1A1P48729 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CSNK1A1P48729 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1A1P48729 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
CSNK1A1P48729 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CSNK1A1P48729 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1A1P48729 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1A1P48729 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1A1P48729 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.98■□□□□ 0.47
CSNK1A1P48729 KRT18P68-201ENST00000392293 1000 ntBASIC17.98■□□□□ 0.47
CSNK1A1P48729 AL512625.2-201ENST00000417533 625 ntBASIC17.98■□□□□ 0.47
CSNK1A1P48729 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.98■□□□□ 0.47
CSNK1A1P48729 AC006970.2-201ENST00000450065 779 ntBASIC17.98■□□□□ 0.47
CSNK1A1P48729 AC093787.1-201ENST00000450396 207 ntBASIC17.98■□□□□ 0.47
CSNK1A1P48729 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.98■□□□□ 0.47
CSNK1A1P48729 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1A1P48729 CYP2T3P-201ENST00000601990 817 ntBASIC17.98■□□□□ 0.47
CSNK1A1P48729 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1A1P48729 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1A1P48729 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1A1P48729 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1A1P48729 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.98■□□□□ 0.47
CSNK1A1P48729 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.98■□□□□ 0.47
CSNK1A1P48729 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1A1P48729 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CSNK1A1P48729 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1A1P48729 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1A1P48729 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1A1P48729 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1A1P48729 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1A1P48729 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CSNK1A1P48729 AC010980.2-201ENST00000587099 1412 ntBASIC17.98■□□□□ 0.47
CSNK1A1P48729 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.98■□□□□ 0.47
CSNK1A1P48729 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1A1P48729 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1A1P48729 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CSNK1A1P48729 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1A1P48729 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.97■□□□□ 0.47
CSNK1A1P48729 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1A1P48729 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.97■□□□□ 0.47
CSNK1A1P48729 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1A1P48729 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1A1P48729 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1A1P48729 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.97■□□□□ 0.47
CSNK1A1P48729 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1A1P48729 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.97■□□□□ 0.47
CSNK1A1P48729 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.97■□□□□ 0.47
CSNK1A1P48729 AL355472.2-201ENST00000422958 438 ntBASIC17.97■□□□□ 0.47
CSNK1A1P48729 CROCCP5-201ENST00000436658 830 ntBASIC17.97■□□□□ 0.47
CSNK1A1P48729 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.97■□□□□ 0.47
CSNK1A1P48729 AF201337.1-201ENST00000520239 748 ntBASIC17.97■□□□□ 0.47
CSNK1A1P48729 AC105036.2-201ENST00000569468 176 ntBASIC17.97■□□□□ 0.47
CSNK1A1P48729 AL050303.2-201ENST00000619798 666 ntBASIC17.97■□□□□ 0.47
CSNK1A1P48729 AC105020.6-201ENST00000621523 1217 ntBASIC17.97■□□□□ 0.47
CSNK1A1P48729 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1A1P48729 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1A1P48729 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1A1P48729 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1A1P48729 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CSNK1A1P48729 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1A1P48729 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CSNK1A1P48729 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.97■□□□□ 0.47
CSNK1A1P48729 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
CSNK1A1P48729 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1A1P48729 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1A1P48729 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
CSNK1A1P48729 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.96■□□□□ 0.47
CSNK1A1P48729 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.96■□□□□ 0.47
CSNK1A1P48729 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1A1P48729 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.96■□□□□ 0.47
CSNK1A1P48729 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1A1P48729 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1A1P48729 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.96■□□□□ 0.47
CSNK1A1P48729 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1A1P48729 AL589743.5-201ENST00000616611 1050 ntBASIC17.96■□□□□ 0.47
CSNK1A1P48729 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1A1P48729 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.96■□□□□ 0.47
CSNK1A1P48729 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CSNK1A1P48729 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1A1P48729 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CSNK1A1P48729 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1A1P48729 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
CSNK1A1P48729 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.95■□□□□ 0.46
CSNK1A1P48729 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1A1P48729 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1A1P48729 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1A1P48729 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1A1P48729 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1A1P48729 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1A1P48729 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1A1P48729 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1A1P48729 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.95■□□□□ 0.46
CSNK1A1P48729 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CSNK1A1P48729 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.95■□□□□ 0.46
CSNK1A1P48729 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.95■□□□□ 0.46
CSNK1A1P48729 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.95■□□□□ 0.46
CSNK1A1P48729 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.95■□□□□ 0.46
CSNK1A1P48729 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.95■□□□□ 0.46
CSNK1A1P48729 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms