Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.36■□□□□ 0.53
GDF1P27539 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.36■□□□□ 0.53
GDF1P27539 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
GDF1P27539 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
GDF1P27539 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
GDF1P27539 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GDF1P27539 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GDF1P27539 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GDF1P27539 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GDF1P27539 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GDF1P27539 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
GDF1P27539 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
GDF1P27539 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GDF1P27539 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GDF1P27539 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GDF1P27539 AC128676.1-201ENST00000454392 318 ntBASIC18.35■□□□□ 0.53
GDF1P27539 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GDF1P27539 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.35■□□□□ 0.53
GDF1P27539 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.35■□□□□ 0.53
GDF1P27539 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GDF1P27539 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GDF1P27539 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GDF1P27539 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
GDF1P27539 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GDF1P27539 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.35■□□□□ 0.53
GDF1P27539 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
GDF1P27539 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.34■□□□□ 0.53
GDF1P27539 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
GDF1P27539 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GDF1P27539 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GDF1P27539 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GDF1P27539 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GDF1P27539 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.34■□□□□ 0.53
GDF1P27539 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.34■□□□□ 0.53
GDF1P27539 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.34■□□□□ 0.53
GDF1P27539 AC008403.3-201ENST00000598924 454 ntBASIC18.34■□□□□ 0.53
GDF1P27539 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.34■□□□□ 0.53
GDF1P27539 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
GDF1P27539 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GDF1P27539 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GDF1P27539 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.34■□□□□ 0.53
GDF1P27539 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
GDF1P27539 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GDF1P27539 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.33■□□□□ 0.53
GDF1P27539 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
GDF1P27539 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GDF1P27539 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GDF1P27539 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GDF1P27539 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GDF1P27539 PRORSD1P-201ENST00000295112 541 ntBASIC18.33■□□□□ 0.52
GDF1P27539 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GDF1P27539 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GDF1P27539 KRT17P3-201ENST00000420566 1262 ntBASIC18.33■□□□□ 0.52
GDF1P27539 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
GDF1P27539 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.33■□□□□ 0.52
GDF1P27539 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GDF1P27539 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.33■□□□□ 0.52
GDF1P27539 AC073648.6-201ENST00000641589 218 ntBASIC18.33■□□□□ 0.52
GDF1P27539 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GDF1P27539 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GDF1P27539 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.33■□□□□ 0.52
GDF1P27539 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GDF1P27539 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GDF1P27539 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GDF1P27539 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GDF1P27539 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GDF1P27539 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
GDF1P27539 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GDF1P27539 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
GDF1P27539 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.32■□□□□ 0.52
GDF1P27539 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
GDF1P27539 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GDF1P27539 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GDF1P27539 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
GDF1P27539 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GDF1P27539 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.32■□□□□ 0.52
GDF1P27539 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GDF1P27539 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GDF1P27539 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GDF1P27539 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.32■□□□□ 0.52
GDF1P27539 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.32■□□□□ 0.52
GDF1P27539 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.32■□□□□ 0.52
GDF1P27539 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.32■□□□□ 0.52
GDF1P27539 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.32■□□□□ 0.52
GDF1P27539 AC005829.2-201ENST00000571422 1056 ntBASIC18.32■□□□□ 0.52
GDF1P27539 AC006557.6-201ENST00000623071 864 ntBASIC18.32■□□□□ 0.52
GDF1P27539 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GDF1P27539 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
GDF1P27539 AL121603.2-201ENST00000557373 2117 ntBASIC18.32■□□□□ 0.52
GDF1P27539 AC007375.3-201ENST00000600936 2314 ntBASIC18.32■□□□□ 0.52
GDF1P27539 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GDF1P27539 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
GDF1P27539 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
GDF1P27539 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
GDF1P27539 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GDF1P27539 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GDF1P27539 AC008687.6-201ENST00000596318 630 ntBASIC18.31■□□□□ 0.52
GDF1P27539 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GDF1P27539 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
GDF1P27539 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms