Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMGN1P05114 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMGN1P05114 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HMGN1P05114 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.27■□□□□ 0.52
HMGN1P05114 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMGN1P05114 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMGN1P05114 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMGN1P05114 IRS3P-201ENST00000223076 1006 ntBASIC18.27■□□□□ 0.52
HMGN1P05114 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMGN1P05114 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HMGN1P05114 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HMGN1P05114 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HMGN1P05114 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.27■□□□□ 0.52
HMGN1P05114 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HMGN1P05114 SUDS3P1-201ENST00000505831 966 ntBASIC18.27■□□□□ 0.52
HMGN1P05114 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMGN1P05114 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.27■□□□□ 0.52
HMGN1P05114 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMGN1P05114 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.27■□□□□ 0.52
HMGN1P05114 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HMGN1P05114 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.27■□□□□ 0.51
HMGN1P05114 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.27■□□□□ 0.51
HMGN1P05114 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
HMGN1P05114 TMEM179-206ENST00000616017 1645 ntBASIC18.27■□□□□ 0.51
HMGN1P05114 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HMGN1P05114 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HMGN1P05114 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HMGN1P05114 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.26■□□□□ 0.51
HMGN1P05114 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HMGN1P05114 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGN1P05114 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGN1P05114 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.26■□□□□ 0.51
HMGN1P05114 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.26■□□□□ 0.51
HMGN1P05114 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
HMGN1P05114 KRT8P36-201ENST00000489121 1440 ntBASIC18.26■□□□□ 0.51
HMGN1P05114 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGN1P05114 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HMGN1P05114 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HMGN1P05114 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HMGN1P05114 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.26■□□□□ 0.51
HMGN1P05114 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HMGN1P05114 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HMGN1P05114 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.26■□□□□ 0.51
HMGN1P05114 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.26■□□□□ 0.51
HMGN1P05114 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HMGN1P05114 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.26■□□□□ 0.51
HMGN1P05114 MIR6084-201ENST00000622012 110 ntBASIC18.26■□□□□ 0.51
HMGN1P05114 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HMGN1P05114 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HMGN1P05114 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGN1P05114 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HMGN1P05114 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.26■□□□□ 0.51
HMGN1P05114 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.26■□□□□ 0.51
HMGN1P05114 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HMGN1P05114 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGN1P05114 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.26■□□□□ 0.51
HMGN1P05114 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HMGN1P05114 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGN1P05114 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGN1P05114 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGN1P05114 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HMGN1P05114 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.25■□□□□ 0.51
HMGN1P05114 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGN1P05114 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGN1P05114 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HMGN1P05114 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGN1P05114 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGN1P05114 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGN1P05114 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HMGN1P05114 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGN1P05114 KRT18P20-201ENST00000548986 1279 ntBASIC18.25■□□□□ 0.51
HMGN1P05114 SLC7A5P2-201ENST00000553010 536 ntBASIC18.25■□□□□ 0.51
HMGN1P05114 CCDC92B-201ENST00000575506 885 ntBASIC18.25■□□□□ 0.51
HMGN1P05114 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.25■□□□□ 0.51
HMGN1P05114 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
HMGN1P05114 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.25■□□□□ 0.51
HMGN1P05114 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.25■□□□□ 0.51
HMGN1P05114 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.25■□□□□ 0.51
HMGN1P05114 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGN1P05114 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
HMGN1P05114 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HMGN1P05114 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HMGN1P05114 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGN1P05114 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.25■□□□□ 0.51
HMGN1P05114 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.24■□□□□ 0.51
HMGN1P05114 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGN1P05114 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.24■□□□□ 0.51
HMGN1P05114 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.24■□□□□ 0.51
HMGN1P05114 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.24■□□□□ 0.51
HMGN1P05114 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGN1P05114 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.24■□□□□ 0.51
HMGN1P05114 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGN1P05114 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGN1P05114 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGN1P05114 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGN1P05114 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.24■□□□□ 0.51
HMGN1P05114 AP001160.3-201ENST00000601484 763 ntBASIC18.24■□□□□ 0.51
HMGN1P05114 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HMGN1P05114 DPP3P2-201ENST00000416030 1696 ntBASIC18.24■□□□□ 0.51
HMGN1P05114 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms