Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.55■□□□□ 0.88
KDELR3O43731 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.55■□□□□ 0.88
KDELR3O43731 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KDELR3O43731 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KDELR3O43731 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
KDELR3O43731 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.54■□□□□ 0.88
KDELR3O43731 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KDELR3O43731 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KDELR3O43731 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KDELR3O43731 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KDELR3O43731 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KDELR3O43731 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.54■□□□□ 0.88
KDELR3O43731 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
KDELR3O43731 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KDELR3O43731 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KDELR3O43731 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KDELR3O43731 AP005212.1-201ENST00000581547 1997 ntBASIC20.54■□□□□ 0.88
KDELR3O43731 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KDELR3O43731 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.53■□□□□ 0.88
KDELR3O43731 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.53■□□□□ 0.88
KDELR3O43731 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KDELR3O43731 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KDELR3O43731 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KDELR3O43731 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KDELR3O43731 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KDELR3O43731 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.53■□□□□ 0.88
KDELR3O43731 AC005829.2-201ENST00000571422 1056 ntBASIC20.53■□□□□ 0.88
KDELR3O43731 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.53■□□□□ 0.88
KDELR3O43731 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KDELR3O43731 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KDELR3O43731 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KDELR3O43731 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KDELR3O43731 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KDELR3O43731 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.53■□□□□ 0.88
KDELR3O43731 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.53■□□□□ 0.88
KDELR3O43731 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KDELR3O43731 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KDELR3O43731 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
KDELR3O43731 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KDELR3O43731 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KDELR3O43731 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.52■□□□□ 0.88
KDELR3O43731 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.52■□□□□ 0.88
KDELR3O43731 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
KDELR3O43731 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.52■□□□□ 0.88
KDELR3O43731 UNC93B5-201ENST00000530315 699 ntBASIC20.52■□□□□ 0.88
KDELR3O43731 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
KDELR3O43731 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.52■□□□□ 0.88
KDELR3O43731 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KDELR3O43731 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KDELR3O43731 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KDELR3O43731 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
KDELR3O43731 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KDELR3O43731 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
KDELR3O43731 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
KDELR3O43731 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
KDELR3O43731 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KDELR3O43731 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.51■□□□□ 0.87
KDELR3O43731 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
KDELR3O43731 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.51■□□□□ 0.87
KDELR3O43731 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KDELR3O43731 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KDELR3O43731 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.51■□□□□ 0.87
KDELR3O43731 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KDELR3O43731 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KDELR3O43731 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KDELR3O43731 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.51■□□□□ 0.87
KDELR3O43731 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
KDELR3O43731 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KDELR3O43731 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.51■□□□□ 0.87
KDELR3O43731 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.51■□□□□ 0.87
KDELR3O43731 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.51■□□□□ 0.87
KDELR3O43731 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.51■□□□□ 0.87
KDELR3O43731 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.51■□□□□ 0.87
KDELR3O43731 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
KDELR3O43731 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.51■□□□□ 0.87
KDELR3O43731 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
KDELR3O43731 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KDELR3O43731 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KDELR3O43731 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
KDELR3O43731 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.5■□□□□ 0.87
KDELR3O43731 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KDELR3O43731 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
KDELR3O43731 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KDELR3O43731 GABARAPL3-202ENST00000624044 1851 ntBASIC20.5■□□□□ 0.87
KDELR3O43731 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
KDELR3O43731 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.5■□□□□ 0.87
KDELR3O43731 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.5■□□□□ 0.87
KDELR3O43731 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KDELR3O43731 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.5■□□□□ 0.87
KDELR3O43731 AL390719.1-204ENST00000412397 1219 ntBASIC20.5■□□□□ 0.87
KDELR3O43731 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.5■□□□□ 0.87
KDELR3O43731 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
KDELR3O43731 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.5■□□□□ 0.87
KDELR3O43731 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KDELR3O43731 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.5■□□□□ 0.87
KDELR3O43731 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
KDELR3O43731 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
KDELR3O43731 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
KDELR3O43731 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KDELR3O43731 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms