Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 AL512604.2-201ENST00000426946 1314 ntTSL 5 BASIC8.87□□□□□ -0.99
UBE4BO95155 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
UBE4BO95155 DDX11L16-201ENST00000507418 1306 ntBASIC8.87□□□□□ -0.99
UBE4BO95155 PCDH18-205ENST00000511115 1331 ntTSL 2 BASIC8.87□□□□□ -0.99
UBE4BO95155 OR8G3P-203ENST00000641848 1344 ntBASIC8.87□□□□□ -0.99
UBE4BO95155 MSH5-205ENST00000395853 2704 ntTSL 2 BASIC8.87□□□□□ -0.99
UBE4BO95155 AL161725.1-201ENST00000591577 1351 ntTSL 5 BASIC8.87□□□□□ -0.99
UBE4BO95155 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC8.87□□□□□ -0.99
UBE4BO95155 PIWIL3-201ENST00000332271 3504 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
UBE4BO95155 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC8.87□□□□□ -0.99
UBE4BO95155 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC8.87□□□□□ -0.99
UBE4BO95155 MAPK10-343ENST00000641677 2546 ntBASIC8.87□□□□□ -0.99
UBE4BO95155 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
UBE4BO95155 AC104083.1-201ENST00000569449 2615 ntBASIC8.87□□□□□ -0.99
UBE4BO95155 LPAR6-202ENST00000378434 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
UBE4BO95155 RNF145-209ENST00000520638 2340 ntTSL 2 BASIC8.87□□□□□ -0.99
UBE4BO95155 OR9M1P-202ENST00000641564 3163 ntBASIC8.86□□□□□ -0.99
UBE4BO95155 AC105046.1-201ENST00000566457 4997 ntBASIC8.86□□□□□ -0.99
UBE4BO95155 OR56A1-201ENST00000316650 1071 ntBASIC8.86□□□□□ -0.99
UBE4BO95155 AC093392.1-201ENST00000366280 340 ntBASIC8.86□□□□□ -0.99
UBE4BO95155 ATF3-204ENST00000366983 858 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
UBE4BO95155 DYNLT3-202ENST00000378581 920 ntTSL 2 BASIC8.86□□□□□ -0.99
UBE4BO95155 IGHV1-24-201ENST00000390610 411 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
UBE4BO95155 AL161787.1-201ENST00000401543 174 ntBASIC8.86□□□□□ -0.99
UBE4BO95155 BMP2KL-201ENST00000414251 1225 ntBASIC8.86□□□□□ -0.99
UBE4BO95155 RBMS1P1-201ENST00000417216 1156 ntBASIC8.86□□□□□ -0.99
UBE4BO95155 AL391863.1-201ENST00000422776 743 ntTSL 3 BASIC8.86□□□□□ -0.99
UBE4BO95155 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
UBE4BO95155 Z98752.2-201ENST00000432727 312 ntBASIC8.86□□□□□ -0.99
UBE4BO95155 AL023584.1-201ENST00000437067 349 ntTSL 3 BASIC8.86□□□□□ -0.99
UBE4BO95155 SMYD1-202ENST00000438570 680 ntTSL 2 BASIC8.86□□□□□ -0.99
UBE4BO95155 HIPK1-AS1-203ENST00000441071 571 ntTSL 3 BASIC8.86□□□□□ -0.99
UBE4BO95155 AL135908.1-202ENST00000454135 562 ntTSL 2 BASIC8.86□□□□□ -0.99
UBE4BO95155 AL645924.2-201ENST00000508865 900 ntBASIC8.86□□□□□ -0.99
UBE4BO95155 AC136604.3-202ENST00000514793 485 ntTSL 5 BASIC8.86□□□□□ -0.99
UBE4BO95155 OPRK1-204ENST00000524278 1195 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
UBE4BO95155 AC006065.2-201ENST00000536978 211 ntBASIC8.86□□□□□ -0.99
UBE4BO95155 AC016954.1-201ENST00000549976 745 ntBASIC8.86□□□□□ -0.99
UBE4BO95155 AC012038.1-201ENST00000551279 552 ntTSL 4 BASIC8.86□□□□□ -0.99
UBE4BO95155 AC073167.1-201ENST00000559303 580 ntTSL 5 BASIC8.86□□□□□ -0.99
UBE4BO95155 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC8.86□□□□□ -0.99
UBE4BO95155 AC009121.1-201ENST00000574681 1095 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
UBE4BO95155 AC068014.1-201ENST00000576836 413 ntTSL 3 BASIC8.86□□□□□ -0.99
UBE4BO95155 LINC02132-201ENST00000598933 750 ntTSL 2 BASIC8.86□□□□□ -0.99
UBE4BO95155 SMG7-216ENST00000638826 219 ntTSL 2 BASIC8.86□□□□□ -0.99
UBE4BO95155 OR56A1-204ENST00000641938 1071 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
UBE4BO95155 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
UBE4BO95155 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC8.86□□□□□ -0.99
UBE4BO95155 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
UBE4BO95155 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
UBE4BO95155 CFI-207ENST00000618244 1345 ntTSL 5 BASIC8.86□□□□□ -0.99
UBE4BO95155 GABRP-203ENST00000518525 3576 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
UBE4BO95155 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC8.86□□□□□ -0.99
UBE4BO95155 MTHFD1L-212ENST00000618312 3159 ntTSL 5 BASIC8.86□□□□□ -0.99
UBE4BO95155 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
UBE4BO95155 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
UBE4BO95155 ZNF887P-201ENST00000431363 1407 ntBASIC8.86□□□□□ -0.99
UBE4BO95155 DIAPH3-201ENST00000267215 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
UBE4BO95155 FMO10P-201ENST00000455032 1493 ntBASIC8.86□□□□□ -0.99
UBE4BO95155 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
UBE4BO95155 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
UBE4BO95155 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC8.86□□□□□ -0.99
UBE4BO95155 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC8.86□□□□□ -0.99
UBE4BO95155 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
UBE4BO95155 GLI1-201ENST00000228682 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
UBE4BO95155 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC8.86□□□□□ -0.99
UBE4BO95155 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
UBE4BO95155 TRAF3IP2-AS1-209ENST00000532226 2191 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
UBE4BO95155 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
UBE4BO95155 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
UBE4BO95155 THAP12P6-201ENST00000431978 2310 ntBASIC8.85□□□□□ -0.99
UBE4BO95155 PARP1P1-201ENST00000413631 3026 ntBASIC8.85□□□□□ -0.99
UBE4BO95155 GANC-206ENST00000566442 2512 ntTSL 2 BASIC8.85□□□□□ -0.99
UBE4BO95155 GLRX-201ENST00000237858 1211 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
UBE4BO95155 IL37-203ENST00000349806 589 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
UBE4BO95155 Metazoa_SRP.2-201ENST00000359385 269 ntBASIC8.85□□□□□ -0.99
UBE4BO95155 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
UBE4BO95155 AC008770.1-201ENST00000406892 1257 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
UBE4BO95155 RN7SKP26-201ENST00000410247 293 ntBASIC8.85□□□□□ -0.99
UBE4BO95155 UPF3AP1-201ENST00000413731 1126 ntBASIC8.85□□□□□ -0.99
UBE4BO95155 LINC00851-201ENST00000423033 727 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
UBE4BO95155 AL162595.2-201ENST00000430677 792 ntTSL 3 BASIC8.85□□□□□ -0.99
UBE4BO95155 MIATNB-204ENST00000437071 1006 ntTSL 3 BASIC8.85□□□□□ -0.99
UBE4BO95155 TTC28-AS1-216ENST00000437713 854 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
UBE4BO95155 ARL2BPP7-201ENST00000446421 490 ntBASIC8.85□□□□□ -0.99
UBE4BO95155 OR7H1P-201ENST00000448965 922 ntBASIC8.85□□□□□ -0.99
UBE4BO95155 AC092569.1-201ENST00000455192 258 ntBASIC8.85□□□□□ -0.99
UBE4BO95155 RPS12P20-201ENST00000464109 380 ntBASIC8.85□□□□□ -0.99
UBE4BO95155 AC108688.1-201ENST00000485817 713 ntBASIC8.85□□□□□ -0.99
UBE4BO95155 AL160314.2-202ENST00000553792 534 ntTSL 5 BASIC8.85□□□□□ -0.99
UBE4BO95155 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC8.85□□□□□ -0.99
UBE4BO95155 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
UBE4BO95155 RN7SL785P-201ENST00000578437 253 ntBASIC8.85□□□□□ -0.99
UBE4BO95155 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC8.85□□□□□ -0.99
UBE4BO95155 AP003121.1-201ENST00000609845 414 ntTSL 3 BASIC8.85□□□□□ -0.99
UBE4BO95155 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC8.85□□□□□ -0.99
UBE4BO95155 ERGIC1-201ENST00000326654 3952 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
UBE4BO95155 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
UBE4BO95155 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
UBE4BO95155 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms