Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TNFRSF11AQ9Y6Q6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TNFRSF11AQ9Y6Q6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC24.9■■□□□ 1.58
TNFRSF11AQ9Y6Q6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC24.9■■□□□ 1.58
TNFRSF11AQ9Y6Q6 POU5F1P3-201ENST00000428824 1078 ntBASIC24.9■■□□□ 1.58
TNFRSF11AQ9Y6Q6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC24.9■■□□□ 1.58
TNFRSF11AQ9Y6Q6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC24.9■■□□□ 1.58
TNFRSF11AQ9Y6Q6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC24.9■■□□□ 1.58
TNFRSF11AQ9Y6Q6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
TNFRSF11AQ9Y6Q6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
TNFRSF11AQ9Y6Q6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TNFRSF11AQ9Y6Q6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TNFRSF11AQ9Y6Q6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TNFRSF11AQ9Y6Q6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TNFRSF11AQ9Y6Q6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
TNFRSF11AQ9Y6Q6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
TNFRSF11AQ9Y6Q6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
TNFRSF11AQ9Y6Q6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
TNFRSF11AQ9Y6Q6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC24.89■■□□□ 1.58
TNFRSF11AQ9Y6Q6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
TNFRSF11AQ9Y6Q6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
TNFRSF11AQ9Y6Q6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
TNFRSF11AQ9Y6Q6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
TNFRSF11AQ9Y6Q6 PGM5P4-201ENST00000421970 445 ntBASIC24.89■■□□□ 1.58
TNFRSF11AQ9Y6Q6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC24.89■■□□□ 1.58
TNFRSF11AQ9Y6Q6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC24.89■■□□□ 1.58
TNFRSF11AQ9Y6Q6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
TNFRSF11AQ9Y6Q6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC24.89■■□□□ 1.57
TNFRSF11AQ9Y6Q6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
TNFRSF11AQ9Y6Q6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC24.89■■□□□ 1.57
TNFRSF11AQ9Y6Q6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
TNFRSF11AQ9Y6Q6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC24.89■■□□□ 1.57
TNFRSF11AQ9Y6Q6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
TNFRSF11AQ9Y6Q6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
TNFRSF11AQ9Y6Q6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC24.88■■□□□ 1.57
TNFRSF11AQ9Y6Q6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
TNFRSF11AQ9Y6Q6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
TNFRSF11AQ9Y6Q6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
TNFRSF11AQ9Y6Q6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
TNFRSF11AQ9Y6Q6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
TNFRSF11AQ9Y6Q6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
TNFRSF11AQ9Y6Q6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
TNFRSF11AQ9Y6Q6 ESRRAP1-201ENST00000400596 1257 ntBASIC24.88■■□□□ 1.57
TNFRSF11AQ9Y6Q6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC24.88■■□□□ 1.57
TNFRSF11AQ9Y6Q6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC24.88■■□□□ 1.57
TNFRSF11AQ9Y6Q6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC24.88■■□□□ 1.57
TNFRSF11AQ9Y6Q6 ADM-205ENST00000528544 586 ntTSL 2 BASIC24.88■■□□□ 1.57
TNFRSF11AQ9Y6Q6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC24.88■■□□□ 1.57
TNFRSF11AQ9Y6Q6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
TNFRSF11AQ9Y6Q6 AC233263.1-201ENST00000578059 224 ntBASIC24.88■■□□□ 1.57
TNFRSF11AQ9Y6Q6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
TNFRSF11AQ9Y6Q6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
TNFRSF11AQ9Y6Q6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
TNFRSF11AQ9Y6Q6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
TNFRSF11AQ9Y6Q6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC24.87■■□□□ 1.57
TNFRSF11AQ9Y6Q6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TNFRSF11AQ9Y6Q6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC24.87■■□□□ 1.57
TNFRSF11AQ9Y6Q6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
TNFRSF11AQ9Y6Q6 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TNFRSF11AQ9Y6Q6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC24.87■■□□□ 1.57
TNFRSF11AQ9Y6Q6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
TNFRSF11AQ9Y6Q6 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
TNFRSF11AQ9Y6Q6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC24.86■■□□□ 1.57
TNFRSF11AQ9Y6Q6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
TNFRSF11AQ9Y6Q6 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
TNFRSF11AQ9Y6Q6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TNFRSF11AQ9Y6Q6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TNFRSF11AQ9Y6Q6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
TNFRSF11AQ9Y6Q6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC24.86■■□□□ 1.57
TNFRSF11AQ9Y6Q6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TNFRSF11AQ9Y6Q6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC24.86■■□□□ 1.57
TNFRSF11AQ9Y6Q6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC24.86■■□□□ 1.57
TNFRSF11AQ9Y6Q6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC24.86■■□□□ 1.57
TNFRSF11AQ9Y6Q6 AC006557.6-201ENST00000623071 864 ntBASIC24.86■■□□□ 1.57
TNFRSF11AQ9Y6Q6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TNFRSF11AQ9Y6Q6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TNFRSF11AQ9Y6Q6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TNFRSF11AQ9Y6Q6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC24.85■■□□□ 1.57
TNFRSF11AQ9Y6Q6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC24.85■■□□□ 1.57
TNFRSF11AQ9Y6Q6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
TNFRSF11AQ9Y6Q6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
TNFRSF11AQ9Y6Q6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
TNFRSF11AQ9Y6Q6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
TNFRSF11AQ9Y6Q6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
TNFRSF11AQ9Y6Q6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
TNFRSF11AQ9Y6Q6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
TNFRSF11AQ9Y6Q6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC24.85■■□□□ 1.57
TNFRSF11AQ9Y6Q6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
TNFRSF11AQ9Y6Q6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC24.85■■□□□ 1.57
TNFRSF11AQ9Y6Q6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
TNFRSF11AQ9Y6Q6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
TNFRSF11AQ9Y6Q6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
TNFRSF11AQ9Y6Q6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC24.85■■□□□ 1.57
TNFRSF11AQ9Y6Q6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
TNFRSF11AQ9Y6Q6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC24.84■■□□□ 1.57
TNFRSF11AQ9Y6Q6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
TNFRSF11AQ9Y6Q6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TNFRSF11AQ9Y6Q6 PRORSD1P-201ENST00000295112 541 ntBASIC24.84■■□□□ 1.57
TNFRSF11AQ9Y6Q6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TNFRSF11AQ9Y6Q6 HES2-205ENST00000487437 968 ntTSL 3 BASIC24.84■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms