Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
PCDHB13Q9Y5F0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB13Q9Y5F0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.37■■□□□ 1.17
PCDHB13Q9Y5F0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB13Q9Y5F0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
PCDHB13Q9Y5F0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHB13Q9Y5F0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDHB13Q9Y5F0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.36■■□□□ 1.17
PCDHB13Q9Y5F0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHB13Q9Y5F0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
PCDHB13Q9Y5F0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
PCDHB13Q9Y5F0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC22.36■■□□□ 1.17
PCDHB13Q9Y5F0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDHB13Q9Y5F0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC22.36■■□□□ 1.17
PCDHB13Q9Y5F0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC22.36■■□□□ 1.17
PCDHB13Q9Y5F0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC22.36■■□□□ 1.17
PCDHB13Q9Y5F0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.36■■□□□ 1.17
PCDHB13Q9Y5F0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
PCDHB13Q9Y5F0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB13Q9Y5F0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB13Q9Y5F0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHB13Q9Y5F0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
PCDHB13Q9Y5F0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
PCDHB13Q9Y5F0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB13Q9Y5F0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB13Q9Y5F0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB13Q9Y5F0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB13Q9Y5F0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHB13Q9Y5F0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB13Q9Y5F0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHB13Q9Y5F0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
PCDHB13Q9Y5F0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.35■■□□□ 1.17
PCDHB13Q9Y5F0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB13Q9Y5F0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB13Q9Y5F0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHB13Q9Y5F0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB13Q9Y5F0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHB13Q9Y5F0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC22.35■■□□□ 1.17
PCDHB13Q9Y5F0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
PCDHB13Q9Y5F0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB13Q9Y5F0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB13Q9Y5F0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHB13Q9Y5F0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB13Q9Y5F0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC22.35■■□□□ 1.17
PCDHB13Q9Y5F0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHB13Q9Y5F0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHB13Q9Y5F0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHB13Q9Y5F0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHB13Q9Y5F0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHB13Q9Y5F0 LSM12P1-201ENST00000411836 588 ntBASIC22.34■■□□□ 1.17
PCDHB13Q9Y5F0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.34■■□□□ 1.17
PCDHB13Q9Y5F0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.34■■□□□ 1.17
PCDHB13Q9Y5F0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
PCDHB13Q9Y5F0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDHB13Q9Y5F0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC22.34■■□□□ 1.17
PCDHB13Q9Y5F0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC22.34■■□□□ 1.17
PCDHB13Q9Y5F0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDHB13Q9Y5F0 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.34■■□□□ 1.17
PCDHB13Q9Y5F0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22.34■■□□□ 1.17
PCDHB13Q9Y5F0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHB13Q9Y5F0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHB13Q9Y5F0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.34■■□□□ 1.17
PCDHB13Q9Y5F0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.34■■□□□ 1.17
PCDHB13Q9Y5F0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHB13Q9Y5F0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
PCDHB13Q9Y5F0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHB13Q9Y5F0 LINC01521-201ENST00000504184 1943 ntBASIC22.33■■□□□ 1.17
PCDHB13Q9Y5F0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHB13Q9Y5F0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHB13Q9Y5F0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHB13Q9Y5F0 KRT17P1-201ENST00000399211 1546 ntBASIC22.33■■□□□ 1.17
PCDHB13Q9Y5F0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHB13Q9Y5F0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC22.33■■□□□ 1.17
PCDHB13Q9Y5F0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHB13Q9Y5F0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHB13Q9Y5F0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
PCDHB13Q9Y5F0 SLC29A4P1-201ENST00000398760 971 ntBASIC22.33■■□□□ 1.17
PCDHB13Q9Y5F0 BX276092.2-201ENST00000417668 665 ntBASIC22.33■■□□□ 1.17
PCDHB13Q9Y5F0 TSPY6P-201ENST00000448518 926 ntBASIC22.33■■□□□ 1.17
PCDHB13Q9Y5F0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
PCDHB13Q9Y5F0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDHB13Q9Y5F0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHB13Q9Y5F0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.33■■□□□ 1.16
PCDHB13Q9Y5F0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHB13Q9Y5F0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHB13Q9Y5F0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHB13Q9Y5F0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDHB13Q9Y5F0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDHB13Q9Y5F0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHB13Q9Y5F0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHB13Q9Y5F0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC22.32■■□□□ 1.16
PCDHB13Q9Y5F0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHB13Q9Y5F0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDHB13Q9Y5F0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
PCDHB13Q9Y5F0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHB13Q9Y5F0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHB13Q9Y5F0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.32■■□□□ 1.16
PCDHB13Q9Y5F0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHB13Q9Y5F0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.32■■□□□ 1.16
PCDHB13Q9Y5F0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms