Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HCFC1R1Q9NWW0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.16■□□□□ 0.98
HCFC1R1Q9NWW0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.16■□□□□ 0.98
HCFC1R1Q9NWW0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.16■□□□□ 0.98
HCFC1R1Q9NWW0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.16■□□□□ 0.98
HCFC1R1Q9NWW0 LINC01023-201ENST00000606054 436 ntBASIC21.16■□□□□ 0.98
HCFC1R1Q9NWW0 AP001412.1-201ENST00000608405 714 ntBASIC21.16■□□□□ 0.98
HCFC1R1Q9NWW0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
HCFC1R1Q9NWW0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
HCFC1R1Q9NWW0 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.16■□□□□ 0.98
HCFC1R1Q9NWW0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HCFC1R1Q9NWW0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
HCFC1R1Q9NWW0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
HCFC1R1Q9NWW0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.15■□□□□ 0.98
HCFC1R1Q9NWW0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
HCFC1R1Q9NWW0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.15■□□□□ 0.98
HCFC1R1Q9NWW0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HCFC1R1Q9NWW0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.15■□□□□ 0.98
HCFC1R1Q9NWW0 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.15■□□□□ 0.98
HCFC1R1Q9NWW0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.15■□□□□ 0.98
HCFC1R1Q9NWW0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.15■□□□□ 0.98
HCFC1R1Q9NWW0 RARRES2P10-201ENST00000564312 460 ntBASIC21.15■□□□□ 0.98
HCFC1R1Q9NWW0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.15■□□□□ 0.98
HCFC1R1Q9NWW0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HCFC1R1Q9NWW0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HCFC1R1Q9NWW0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.15■□□□□ 0.98
HCFC1R1Q9NWW0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.15■□□□□ 0.98
HCFC1R1Q9NWW0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HCFC1R1Q9NWW0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.15■□□□□ 0.98
HCFC1R1Q9NWW0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
HCFC1R1Q9NWW0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HCFC1R1Q9NWW0 KRT8P36-201ENST00000489121 1440 ntBASIC21.14■□□□□ 0.98
HCFC1R1Q9NWW0 EP400NL-214ENST00000641289 2402 ntBASIC21.14■□□□□ 0.97
HCFC1R1Q9NWW0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HCFC1R1Q9NWW0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HCFC1R1Q9NWW0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
HCFC1R1Q9NWW0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.14■□□□□ 0.97
HCFC1R1Q9NWW0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.14■□□□□ 0.97
HCFC1R1Q9NWW0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HCFC1R1Q9NWW0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.14■□□□□ 0.97
HCFC1R1Q9NWW0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.14■□□□□ 0.97
HCFC1R1Q9NWW0 MIR4785-201ENST00000585005 73 ntBASIC21.14■□□□□ 0.97
HCFC1R1Q9NWW0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
HCFC1R1Q9NWW0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.14■□□□□ 0.97
HCFC1R1Q9NWW0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HCFC1R1Q9NWW0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
HCFC1R1Q9NWW0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HCFC1R1Q9NWW0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.14■□□□□ 0.97
HCFC1R1Q9NWW0 MIR2861-201ENST00000636310 90 ntBASIC21.14■□□□□ 0.97
HCFC1R1Q9NWW0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HCFC1R1Q9NWW0 AL024507.2-201ENST00000606070 2574 ntBASIC21.14■□□□□ 0.97
HCFC1R1Q9NWW0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HCFC1R1Q9NWW0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HCFC1R1Q9NWW0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HCFC1R1Q9NWW0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HCFC1R1Q9NWW0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HCFC1R1Q9NWW0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.13■□□□□ 0.97
HCFC1R1Q9NWW0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HCFC1R1Q9NWW0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
HCFC1R1Q9NWW0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HCFC1R1Q9NWW0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HCFC1R1Q9NWW0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.13■□□□□ 0.97
HCFC1R1Q9NWW0 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.13■□□□□ 0.97
HCFC1R1Q9NWW0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HCFC1R1Q9NWW0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
HCFC1R1Q9NWW0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HCFC1R1Q9NWW0 FAM210CP-201ENST00000445714 574 ntBASIC21.13■□□□□ 0.97
HCFC1R1Q9NWW0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.13■□□□□ 0.97
HCFC1R1Q9NWW0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.13■□□□□ 0.97
HCFC1R1Q9NWW0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.13■□□□□ 0.97
HCFC1R1Q9NWW0 AL355075.4-201ENST00000554988 638 ntBASIC21.13■□□□□ 0.97
HCFC1R1Q9NWW0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HCFC1R1Q9NWW0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.13■□□□□ 0.97
HCFC1R1Q9NWW0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HCFC1R1Q9NWW0 AL117328.2-201ENST00000624617 1940 ntBASIC21.13■□□□□ 0.97
HCFC1R1Q9NWW0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
HCFC1R1Q9NWW0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HCFC1R1Q9NWW0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.12■□□□□ 0.97
HCFC1R1Q9NWW0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.12■□□□□ 0.97
HCFC1R1Q9NWW0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
HCFC1R1Q9NWW0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC1R1Q9NWW0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
HCFC1R1Q9NWW0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC1R1Q9NWW0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.12■□□□□ 0.97
HCFC1R1Q9NWW0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.12■□□□□ 0.97
HCFC1R1Q9NWW0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.12■□□□□ 0.97
HCFC1R1Q9NWW0 KRT18P21-201ENST00000515767 1272 ntBASIC21.12■□□□□ 0.97
HCFC1R1Q9NWW0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.12■□□□□ 0.97
HCFC1R1Q9NWW0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.12■□□□□ 0.97
HCFC1R1Q9NWW0 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC1R1Q9NWW0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC1R1Q9NWW0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC1R1Q9NWW0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HCFC1R1Q9NWW0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC1R1Q9NWW0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC1R1Q9NWW0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC1R1Q9NWW0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC1R1Q9NWW0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC1R1Q9NWW0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC1R1Q9NWW0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms