Protein–RNA interactions for Protein: Q9H2H0

CXXC4, CXXC-type zinc finger protein 4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4Q9H2H0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXXC4Q9H2H0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXXC4Q9H2H0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CXXC4Q9H2H0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXXC4Q9H2H0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CXXC4Q9H2H0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CXXC4Q9H2H0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.69■□□□□ 0.42
CXXC4Q9H2H0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CXXC4Q9H2H0 AC069544.1-201ENST00000609399 999 ntBASIC17.69■□□□□ 0.42
CXXC4Q9H2H0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.69■□□□□ 0.42
CXXC4Q9H2H0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CXXC4Q9H2H0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXXC4Q9H2H0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CXXC4Q9H2H0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CXXC4Q9H2H0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXXC4Q9H2H0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.69■□□□□ 0.42
CXXC4Q9H2H0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXXC4Q9H2H0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXXC4Q9H2H0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXXC4Q9H2H0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CXXC4Q9H2H0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CXXC4Q9H2H0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXXC4Q9H2H0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.68■□□□□ 0.42
CXXC4Q9H2H0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXXC4Q9H2H0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CXXC4Q9H2H0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CXXC4Q9H2H0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.68■□□□□ 0.42
CXXC4Q9H2H0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CXXC4Q9H2H0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXXC4Q9H2H0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.68■□□□□ 0.42
CXXC4Q9H2H0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.68■□□□□ 0.42
CXXC4Q9H2H0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.68■□□□□ 0.42
CXXC4Q9H2H0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CXXC4Q9H2H0 AL137060.1-201ENST00000618151 2648 ntBASIC17.68■□□□□ 0.42
CXXC4Q9H2H0 AC097493.4-201ENST00000641197 219 ntBASIC17.68■□□□□ 0.42
CXXC4Q9H2H0 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CXXC4Q9H2H0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.68■□□□□ 0.42
CXXC4Q9H2H0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXXC4Q9H2H0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.68■□□□□ 0.42
CXXC4Q9H2H0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXXC4Q9H2H0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXXC4Q9H2H0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CXXC4Q9H2H0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CXXC4Q9H2H0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXXC4Q9H2H0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CXXC4Q9H2H0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.67■□□□□ 0.42
CXXC4Q9H2H0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXXC4Q9H2H0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CXXC4Q9H2H0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CXXC4Q9H2H0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
CXXC4Q9H2H0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.67■□□□□ 0.42
CXXC4Q9H2H0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXXC4Q9H2H0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CXXC4Q9H2H0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXXC4Q9H2H0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXXC4Q9H2H0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CXXC4Q9H2H0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXXC4Q9H2H0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXXC4Q9H2H0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CXXC4Q9H2H0 RPS2P55-201ENST00000397318 883 ntBASIC17.66■□□□□ 0.42
CXXC4Q9H2H0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXXC4Q9H2H0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.66■□□□□ 0.42
CXXC4Q9H2H0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CXXC4Q9H2H0 AC107956.1-201ENST00000494359 873 ntBASIC17.66■□□□□ 0.42
CXXC4Q9H2H0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXXC4Q9H2H0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.66■□□□□ 0.42
CXXC4Q9H2H0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXXC4Q9H2H0 AC233263.1-201ENST00000578059 224 ntBASIC17.66■□□□□ 0.42
CXXC4Q9H2H0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.66■□□□□ 0.42
CXXC4Q9H2H0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.66■□□□□ 0.42
CXXC4Q9H2H0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.66■□□□□ 0.42
CXXC4Q9H2H0 FAM21FP-204ENST00000608637 956 ntBASIC17.66■□□□□ 0.42
CXXC4Q9H2H0 AC012306.2-201ENST00000609350 630 ntBASIC17.66■□□□□ 0.42
CXXC4Q9H2H0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.66■□□□□ 0.42
CXXC4Q9H2H0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CXXC4Q9H2H0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXXC4Q9H2H0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CXXC4Q9H2H0 AC092368.3-202ENST00000574180 1591 ntBASIC17.66■□□□□ 0.42
CXXC4Q9H2H0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.66■□□□□ 0.42
CXXC4Q9H2H0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXXC4Q9H2H0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.65■□□□□ 0.42
CXXC4Q9H2H0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.65■□□□□ 0.42
CXXC4Q9H2H0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.65■□□□□ 0.42
CXXC4Q9H2H0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.65■□□□□ 0.42
CXXC4Q9H2H0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXXC4Q9H2H0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CXXC4Q9H2H0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXXC4Q9H2H0 RCN1P1-201ENST00000400413 996 ntBASIC17.65■□□□□ 0.42
CXXC4Q9H2H0 AL355472.2-201ENST00000422958 438 ntBASIC17.65■□□□□ 0.42
CXXC4Q9H2H0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXXC4Q9H2H0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.65■□□□□ 0.42
CXXC4Q9H2H0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CXXC4Q9H2H0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CXXC4Q9H2H0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.65■□□□□ 0.42
CXXC4Q9H2H0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.65■□□□□ 0.42
CXXC4Q9H2H0 AC133561.5-201ENST00000635547 218 ntBASIC17.65■□□□□ 0.42
CXXC4Q9H2H0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.65■□□□□ 0.42
CXXC4Q9H2H0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXXC4Q9H2H0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CXXC4Q9H2H0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms