Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BBS4Q96RK4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BBS4Q96RK4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BBS4Q96RK4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
BBS4Q96RK4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
BBS4Q96RK4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
BBS4Q96RK4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BBS4Q96RK4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.18■□□□□ 0.66
BBS4Q96RK4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BBS4Q96RK4 AC016405.3-201ENST00000607710 860 ntBASIC19.18■□□□□ 0.66
BBS4Q96RK4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
BBS4Q96RK4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.18■□□□□ 0.66
BBS4Q96RK4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
BBS4Q96RK4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
BBS4Q96RK4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BBS4Q96RK4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.18■□□□□ 0.66
BBS4Q96RK4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.18■□□□□ 0.66
BBS4Q96RK4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
BBS4Q96RK4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.18■□□□□ 0.66
BBS4Q96RK4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
BBS4Q96RK4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BBS4Q96RK4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BBS4Q96RK4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
BBS4Q96RK4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
BBS4Q96RK4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
BBS4Q96RK4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.17■□□□□ 0.66
BBS4Q96RK4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BBS4Q96RK4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BBS4Q96RK4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BBS4Q96RK4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BBS4Q96RK4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.17■□□□□ 0.66
BBS4Q96RK4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
BBS4Q96RK4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.17■□□□□ 0.66
BBS4Q96RK4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.17■□□□□ 0.66
BBS4Q96RK4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.17■□□□□ 0.66
BBS4Q96RK4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
BBS4Q96RK4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BBS4Q96RK4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BBS4Q96RK4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BBS4Q96RK4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BBS4Q96RK4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BBS4Q96RK4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
BBS4Q96RK4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BBS4Q96RK4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BBS4Q96RK4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
BBS4Q96RK4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BBS4Q96RK4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BBS4Q96RK4 KRT8P36-201ENST00000489121 1440 ntBASIC19.17■□□□□ 0.66
BBS4Q96RK4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
BBS4Q96RK4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BBS4Q96RK4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
BBS4Q96RK4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
BBS4Q96RK4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
BBS4Q96RK4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
BBS4Q96RK4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
BBS4Q96RK4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.16■□□□□ 0.66
BBS4Q96RK4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
BBS4Q96RK4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
BBS4Q96RK4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.16■□□□□ 0.66
BBS4Q96RK4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BBS4Q96RK4 CNN2P6-201ENST00000439038 900 ntBASIC19.16■□□□□ 0.66
BBS4Q96RK4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.16■□□□□ 0.66
BBS4Q96RK4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.16■□□□□ 0.66
BBS4Q96RK4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.16■□□□□ 0.66
BBS4Q96RK4 AC231657.2-201ENST00000624556 255 ntBASIC19.16■□□□□ 0.66
BBS4Q96RK4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
BBS4Q96RK4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BBS4Q96RK4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BBS4Q96RK4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BBS4Q96RK4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
BBS4Q96RK4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BBS4Q96RK4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BBS4Q96RK4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BBS4Q96RK4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BBS4Q96RK4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
BBS4Q96RK4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BBS4Q96RK4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BBS4Q96RK4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
BBS4Q96RK4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BBS4Q96RK4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BBS4Q96RK4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.15■□□□□ 0.66
BBS4Q96RK4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BBS4Q96RK4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.15■□□□□ 0.66
BBS4Q96RK4 AC007322.1-201ENST00000426983 750 ntBASIC19.15■□□□□ 0.66
BBS4Q96RK4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BBS4Q96RK4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.15■□□□□ 0.66
BBS4Q96RK4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.15■□□□□ 0.66
BBS4Q96RK4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.15■□□□□ 0.66
BBS4Q96RK4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
BBS4Q96RK4 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.15■□□□□ 0.66
BBS4Q96RK4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.15■□□□□ 0.66
BBS4Q96RK4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.15■□□□□ 0.66
BBS4Q96RK4 AC068338.2-201ENST00000563278 1430 ntBASIC19.15■□□□□ 0.66
BBS4Q96RK4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BBS4Q96RK4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.15■□□□□ 0.66
BBS4Q96RK4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BBS4Q96RK4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BBS4Q96RK4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
BBS4Q96RK4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
BBS4Q96RK4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms