Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
ZNF560Q96MR9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.7■■□□□ 1.06
ZNF560Q96MR9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.7■■□□□ 1.06
ZNF560Q96MR9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.69■■□□□ 1.06
ZNF560Q96MR9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.69■■□□□ 1.06
ZNF560Q96MR9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF560Q96MR9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.69■■□□□ 1.06
ZNF560Q96MR9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
ZNF560Q96MR9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.69■■□□□ 1.06
ZNF560Q96MR9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF560Q96MR9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF560Q96MR9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
ZNF560Q96MR9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF560Q96MR9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.69■■□□□ 1.06
ZNF560Q96MR9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.69■■□□□ 1.06
ZNF560Q96MR9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.69■■□□□ 1.06
ZNF560Q96MR9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.69■■□□□ 1.06
ZNF560Q96MR9 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.69■■□□□ 1.06
ZNF560Q96MR9 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF560Q96MR9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.69■■□□□ 1.06
ZNF560Q96MR9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF560Q96MR9 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
ZNF560Q96MR9 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF560Q96MR9 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
ZNF560Q96MR9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.69■■□□□ 1.06
ZNF560Q96MR9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.69■■□□□ 1.06
ZNF560Q96MR9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF560Q96MR9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF560Q96MR9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
ZNF560Q96MR9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF560Q96MR9 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.68■■□□□ 1.06
ZNF560Q96MR9 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF560Q96MR9 AL390719.1-204ENST00000412397 1219 ntBASIC21.68■■□□□ 1.06
ZNF560Q96MR9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF560Q96MR9 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.68■■□□□ 1.06
ZNF560Q96MR9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF560Q96MR9 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.68■■□□□ 1.06
ZNF560Q96MR9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF560Q96MR9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.68■■□□□ 1.06
ZNF560Q96MR9 SOX15-203ENST00000570788 1093 ntBASIC21.68■■□□□ 1.06
ZNF560Q96MR9 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
ZNF560Q96MR9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
ZNF560Q96MR9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF560Q96MR9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF560Q96MR9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.68■■□□□ 1.06
ZNF560Q96MR9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF560Q96MR9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF560Q96MR9 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.68■■□□□ 1.06
ZNF560Q96MR9 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF560Q96MR9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.68■■□□□ 1.06
ZNF560Q96MR9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
ZNF560Q96MR9 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF560Q96MR9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
ZNF560Q96MR9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF560Q96MR9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.67■■□□□ 1.06
ZNF560Q96MR9 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF560Q96MR9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF560Q96MR9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF560Q96MR9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF560Q96MR9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF560Q96MR9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF560Q96MR9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF560Q96MR9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF560Q96MR9 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF560Q96MR9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.67■■□□□ 1.06
ZNF560Q96MR9 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF560Q96MR9 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF560Q96MR9 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
ZNF560Q96MR9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF560Q96MR9 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF560Q96MR9 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
ZNF560Q96MR9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
ZNF560Q96MR9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
ZNF560Q96MR9 UNC93B4-201ENST00000505679 747 ntBASIC21.67■■□□□ 1.06
ZNF560Q96MR9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.67■■□□□ 1.06
ZNF560Q96MR9 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.67■■□□□ 1.06
ZNF560Q96MR9 AC005829.2-201ENST00000571422 1056 ntBASIC21.67■■□□□ 1.06
ZNF560Q96MR9 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.67■■□□□ 1.06
ZNF560Q96MR9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.67■■□□□ 1.06
ZNF560Q96MR9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF560Q96MR9 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.67■■□□□ 1.06
ZNF560Q96MR9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF560Q96MR9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
ZNF560Q96MR9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF560Q96MR9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.66■■□□□ 1.06
ZNF560Q96MR9 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF560Q96MR9 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF560Q96MR9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF560Q96MR9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.66■■□□□ 1.06
ZNF560Q96MR9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
ZNF560Q96MR9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF560Q96MR9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF560Q96MR9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.66■■□□□ 1.06
ZNF560Q96MR9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF560Q96MR9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.66■■□□□ 1.06
ZNF560Q96MR9 AC023632.3-201ENST00000521633 145 ntBASIC21.66■■□□□ 1.06
ZNF560Q96MR9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.66■■□□□ 1.06
ZNF560Q96MR9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF560Q96MR9 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.66■■□□□ 1.06
ZNF560Q96MR9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms