Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.3■□□□□ 0.84
ECHDC3Q96DC8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ECHDC3Q96DC8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ECHDC3Q96DC8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.3■□□□□ 0.84
ECHDC3Q96DC8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ECHDC3Q96DC8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ECHDC3Q96DC8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ECHDC3Q96DC8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
ECHDC3Q96DC8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ECHDC3Q96DC8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ECHDC3Q96DC8 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ECHDC3Q96DC8 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.3■□□□□ 0.84
ECHDC3Q96DC8 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.3■□□□□ 0.84
ECHDC3Q96DC8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
ECHDC3Q96DC8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.3■□□□□ 0.84
ECHDC3Q96DC8 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.3■□□□□ 0.84
ECHDC3Q96DC8 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ECHDC3Q96DC8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ECHDC3Q96DC8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.3■□□□□ 0.84
ECHDC3Q96DC8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ECHDC3Q96DC8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
ECHDC3Q96DC8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ECHDC3Q96DC8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.29■□□□□ 0.84
ECHDC3Q96DC8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.29■□□□□ 0.84
ECHDC3Q96DC8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
ECHDC3Q96DC8 AC023632.3-201ENST00000521633 145 ntBASIC20.29■□□□□ 0.84
ECHDC3Q96DC8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.29■□□□□ 0.84
ECHDC3Q96DC8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ECHDC3Q96DC8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ECHDC3Q96DC8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ECHDC3Q96DC8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ECHDC3Q96DC8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
ECHDC3Q96DC8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ECHDC3Q96DC8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ECHDC3Q96DC8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ECHDC3Q96DC8 AC092720.2-201ENST00000602388 1665 ntBASIC20.29■□□□□ 0.84
ECHDC3Q96DC8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.28■□□□□ 0.84
ECHDC3Q96DC8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ECHDC3Q96DC8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.28■□□□□ 0.84
ECHDC3Q96DC8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.28■□□□□ 0.84
ECHDC3Q96DC8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ECHDC3Q96DC8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.28■□□□□ 0.84
ECHDC3Q96DC8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ECHDC3Q96DC8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ECHDC3Q96DC8 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.28■□□□□ 0.84
ECHDC3Q96DC8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.28■□□□□ 0.84
ECHDC3Q96DC8 AC005829.2-201ENST00000571422 1056 ntBASIC20.28■□□□□ 0.84
ECHDC3Q96DC8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ECHDC3Q96DC8 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
ECHDC3Q96DC8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ECHDC3Q96DC8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.28■□□□□ 0.84
ECHDC3Q96DC8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ECHDC3Q96DC8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ECHDC3Q96DC8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ECHDC3Q96DC8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.28■□□□□ 0.84
ECHDC3Q96DC8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.27■□□□□ 0.84
ECHDC3Q96DC8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.27■□□□□ 0.84
ECHDC3Q96DC8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.27■□□□□ 0.84
ECHDC3Q96DC8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ECHDC3Q96DC8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ECHDC3Q96DC8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.27■□□□□ 0.84
ECHDC3Q96DC8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.27■□□□□ 0.84
ECHDC3Q96DC8 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ECHDC3Q96DC8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ECHDC3Q96DC8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ECHDC3Q96DC8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ECHDC3Q96DC8 ABHD17AP1-201ENST00000358206 933 ntBASIC20.27■□□□□ 0.84
ECHDC3Q96DC8 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ECHDC3Q96DC8 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.27■□□□□ 0.84
ECHDC3Q96DC8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.27■□□□□ 0.84
ECHDC3Q96DC8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.27■□□□□ 0.84
ECHDC3Q96DC8 TSPY20P-201ENST00000450910 630 ntBASIC20.27■□□□□ 0.84
ECHDC3Q96DC8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ECHDC3Q96DC8 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ECHDC3Q96DC8 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ECHDC3Q96DC8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
ECHDC3Q96DC8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ECHDC3Q96DC8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.26■□□□□ 0.83
ECHDC3Q96DC8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ECHDC3Q96DC8 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.26■□□□□ 0.83
ECHDC3Q96DC8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ECHDC3Q96DC8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ECHDC3Q96DC8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ECHDC3Q96DC8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.26■□□□□ 0.83
ECHDC3Q96DC8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ECHDC3Q96DC8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ECHDC3Q96DC8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.26■□□□□ 0.83
ECHDC3Q96DC8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ECHDC3Q96DC8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.26■□□□□ 0.83
ECHDC3Q96DC8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.26■□□□□ 0.83
ECHDC3Q96DC8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.26■□□□□ 0.83
ECHDC3Q96DC8 AC008403.3-201ENST00000598924 454 ntBASIC20.26■□□□□ 0.83
ECHDC3Q96DC8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
ECHDC3Q96DC8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ECHDC3Q96DC8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.26■□□□□ 0.83
ECHDC3Q96DC8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ECHDC3Q96DC8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
ECHDC3Q96DC8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ECHDC3Q96DC8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
ECHDC3Q96DC8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms