Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXRED1Q96CU9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXRED1Q96CU9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.57■□□□□ 0.4
FOXRED1Q96CU9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXRED1Q96CU9 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.57■□□□□ 0.4
FOXRED1Q96CU9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
FOXRED1Q96CU9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
FOXRED1Q96CU9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 YBX1P1-201ENST00000445822 960 ntBASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 RARRES2P6-201ENST00000567333 442 ntBASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FOXRED1Q96CU9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXRED1Q96CU9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
FOXRED1Q96CU9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXRED1Q96CU9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.55■□□□□ 0.4
FOXRED1Q96CU9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FOXRED1Q96CU9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
FOXRED1Q96CU9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXRED1Q96CU9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
FOXRED1Q96CU9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
FOXRED1Q96CU9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXRED1Q96CU9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FOXRED1Q96CU9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.55■□□□□ 0.4
FOXRED1Q96CU9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXRED1Q96CU9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
FOXRED1Q96CU9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXRED1Q96CU9 KRT87P-202ENST00000534226 1464 ntBASIC17.55■□□□□ 0.4
FOXRED1Q96CU9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXRED1Q96CU9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.55■□□□□ 0.4
FOXRED1Q96CU9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.55■□□□□ 0.4
FOXRED1Q96CU9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXRED1Q96CU9 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
FOXRED1Q96CU9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.54■□□□□ 0.4
FOXRED1Q96CU9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.54■□□□□ 0.4
FOXRED1Q96CU9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FOXRED1Q96CU9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXRED1Q96CU9 AIRN-201ENST00000601203 4374 ntBASIC17.54■□□□□ 0.4
FOXRED1Q96CU9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXRED1Q96CU9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
FOXRED1Q96CU9 AC123595.1-201ENST00000440769 1046 ntBASIC17.54■□□□□ 0.4
FOXRED1Q96CU9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FOXRED1Q96CU9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.54■□□□□ 0.4
FOXRED1Q96CU9 AC138907.5-202ENST00000569484 235 ntBASIC17.54■□□□□ 0.4
FOXRED1Q96CU9 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.54■□□□□ 0.4
FOXRED1Q96CU9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXRED1Q96CU9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXRED1Q96CU9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXRED1Q96CU9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXRED1Q96CU9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.54■□□□□ 0.4
FOXRED1Q96CU9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXRED1Q96CU9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 AC138932.1-201ENST00000534164 6830 ntBASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 TPRG1LP1-201ENST00000598702 760 ntBASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 MIR6084-201ENST00000622012 110 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms