Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PRUNE2Q8WUY3 KRT16P1-201ENST00000399124 1418 ntBASIC21.38■■□□□ 1.01
PRUNE2Q8WUY3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.38■■□□□ 1.01
PRUNE2Q8WUY3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.38■■□□□ 1.01
PRUNE2Q8WUY3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.38■■□□□ 1.01
PRUNE2Q8WUY3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PRUNE2Q8WUY3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.38■■□□□ 1.01
PRUNE2Q8WUY3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PRUNE2Q8WUY3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PRUNE2Q8WUY3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.38■■□□□ 1.01
PRUNE2Q8WUY3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PRUNE2Q8WUY3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PRUNE2Q8WUY3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
PRUNE2Q8WUY3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PRUNE2Q8WUY3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PRUNE2Q8WUY3 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.38■■□□□ 1.01
PRUNE2Q8WUY3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.38■■□□□ 1.01
PRUNE2Q8WUY3 AC117947.1-201ENST00000427448 529 ntBASIC21.38■■□□□ 1.01
PRUNE2Q8WUY3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PRUNE2Q8WUY3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
PRUNE2Q8WUY3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
PRUNE2Q8WUY3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PRUNE2Q8WUY3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.37■■□□□ 1.01
PRUNE2Q8WUY3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.37■■□□□ 1.01
PRUNE2Q8WUY3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PRUNE2Q8WUY3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PRUNE2Q8WUY3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRUNE2Q8WUY3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PRUNE2Q8WUY3 AC245052.3-201ENST00000450182 901 ntBASIC21.37■■□□□ 1.01
PRUNE2Q8WUY3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.37■■□□□ 1.01
PRUNE2Q8WUY3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.37■■□□□ 1.01
PRUNE2Q8WUY3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.37■■□□□ 1.01
PRUNE2Q8WUY3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRUNE2Q8WUY3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRUNE2Q8WUY3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRUNE2Q8WUY3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRUNE2Q8WUY3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PRUNE2Q8WUY3 YBX1P2-201ENST00000489612 999 ntBASIC21.37■■□□□ 1.01
PRUNE2Q8WUY3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.37■■□□□ 1.01
PRUNE2Q8WUY3 FAM87A-204ENST00000613235 858 ntBASIC21.37■■□□□ 1.01
PRUNE2Q8WUY3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.37■■□□□ 1.01
PRUNE2Q8WUY3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PRUNE2Q8WUY3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRUNE2Q8WUY3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRUNE2Q8WUY3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.36■■□□□ 1.01
PRUNE2Q8WUY3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
PRUNE2Q8WUY3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRUNE2Q8WUY3 AC069148.1-201ENST00000608741 768 ntBASIC21.36■■□□□ 1.01
PRUNE2Q8WUY3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.36■■□□□ 1.01
PRUNE2Q8WUY3 AL691432.3-201ENST00000621860 400 ntBASIC21.36■■□□□ 1.01
PRUNE2Q8WUY3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.36■■□□□ 1.01
PRUNE2Q8WUY3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRUNE2Q8WUY3 AC068473.5-201ENST00000616428 2072 ntBASIC21.36■■□□□ 1.01
PRUNE2Q8WUY3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
PRUNE2Q8WUY3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PRUNE2Q8WUY3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRUNE2Q8WUY3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRUNE2Q8WUY3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.35■■□□□ 1.01
PRUNE2Q8WUY3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.35■■□□□ 1.01
PRUNE2Q8WUY3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRUNE2Q8WUY3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.35■■□□□ 1.01
PRUNE2Q8WUY3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRUNE2Q8WUY3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRUNE2Q8WUY3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRUNE2Q8WUY3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRUNE2Q8WUY3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PRUNE2Q8WUY3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PRUNE2Q8WUY3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.34■■□□□ 1.01
PRUNE2Q8WUY3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRUNE2Q8WUY3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.34■■□□□ 1.01
PRUNE2Q8WUY3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.34■■□□□ 1.01
PRUNE2Q8WUY3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRUNE2Q8WUY3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRUNE2Q8WUY3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRUNE2Q8WUY3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.34■■□□□ 1.01
PRUNE2Q8WUY3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.34■■□□□ 1.01
PRUNE2Q8WUY3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRUNE2Q8WUY3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PRUNE2Q8WUY3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRUNE2Q8WUY3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRUNE2Q8WUY3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRUNE2Q8WUY3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.33■■□□□ 1.01
PRUNE2Q8WUY3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRUNE2Q8WUY3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PRUNE2Q8WUY3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRUNE2Q8WUY3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.33■■□□□ 1
PRUNE2Q8WUY3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.33■■□□□ 1
PRUNE2Q8WUY3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.33■■□□□ 1
PRUNE2Q8WUY3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.33■■□□□ 1
PRUNE2Q8WUY3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
PRUNE2Q8WUY3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PRUNE2Q8WUY3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PRUNE2Q8WUY3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
PRUNE2Q8WUY3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.32■■□□□ 1
PRUNE2Q8WUY3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.32■■□□□ 1
PRUNE2Q8WUY3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.32■■□□□ 1
PRUNE2Q8WUY3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC21.32■■□□□ 1
PRUNE2Q8WUY3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.32■■□□□ 1
PRUNE2Q8WUY3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
PRUNE2Q8WUY3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms