Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC168Q8NDH2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC168Q8NDH2 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC168Q8NDH2 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC168Q8NDH2 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCDC168Q8NDH2 ECEL1P2-202ENST00000465689 757 ntBASIC17.05■□□□□ 0.32
CCDC168Q8NDH2 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC168Q8NDH2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC168Q8NDH2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.05■□□□□ 0.32
CCDC168Q8NDH2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC168Q8NDH2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCDC168Q8NDH2 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCDC168Q8NDH2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC168Q8NDH2 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC168Q8NDH2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC168Q8NDH2 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CCDC168Q8NDH2 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC168Q8NDH2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC168Q8NDH2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC168Q8NDH2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CCDC168Q8NDH2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC168Q8NDH2 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.04■□□□□ 0.32
CCDC168Q8NDH2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC168Q8NDH2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC168Q8NDH2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC168Q8NDH2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC168Q8NDH2 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC168Q8NDH2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC168Q8NDH2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.04■□□□□ 0.32
CCDC168Q8NDH2 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC168Q8NDH2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC168Q8NDH2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC168Q8NDH2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC168Q8NDH2 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC168Q8NDH2 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC168Q8NDH2 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CCDC168Q8NDH2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC168Q8NDH2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC168Q8NDH2 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC168Q8NDH2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC168Q8NDH2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC168Q8NDH2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC168Q8NDH2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC168Q8NDH2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC168Q8NDH2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC168Q8NDH2 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CCDC168Q8NDH2 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC168Q8NDH2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC168Q8NDH2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC168Q8NDH2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC168Q8NDH2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC168Q8NDH2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC168Q8NDH2 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC168Q8NDH2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC168Q8NDH2 AC068473.5-201ENST00000616428 2072 ntBASIC17.03■□□□□ 0.32
CCDC168Q8NDH2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC168Q8NDH2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC168Q8NDH2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC168Q8NDH2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC168Q8NDH2 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC168Q8NDH2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC168Q8NDH2 YBX1P2-201ENST00000489612 999 ntBASIC17.03■□□□□ 0.32
CCDC168Q8NDH2 AL691432.3-201ENST00000621860 400 ntBASIC17.03■□□□□ 0.32
CCDC168Q8NDH2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC168Q8NDH2 KRT8P10-201ENST00000450021 1447 ntBASIC17.02■□□□□ 0.32
CCDC168Q8NDH2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC168Q8NDH2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC168Q8NDH2 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC168Q8NDH2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC168Q8NDH2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC168Q8NDH2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.02■□□□□ 0.32
CCDC168Q8NDH2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CCDC168Q8NDH2 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC168Q8NDH2 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.02■□□□□ 0.32
CCDC168Q8NDH2 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC168Q8NDH2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC168Q8NDH2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC168Q8NDH2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
CCDC168Q8NDH2 AC116050.2-201ENST00000612102 1779 ntBASIC17.02■□□□□ 0.31
CCDC168Q8NDH2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC168Q8NDH2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC168Q8NDH2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC168Q8NDH2 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.02■□□□□ 0.31
CCDC168Q8NDH2 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.02■□□□□ 0.31
CCDC168Q8NDH2 AL390719.1-204ENST00000412397 1219 ntBASIC17.02■□□□□ 0.31
CCDC168Q8NDH2 NIFKP9-201ENST00000419265 221 ntBASIC17.02■□□□□ 0.31
CCDC168Q8NDH2 AP005242.2-201ENST00000580065 1175 ntBASIC17.02■□□□□ 0.31
CCDC168Q8NDH2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.02■□□□□ 0.31
CCDC168Q8NDH2 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.02■□□□□ 0.31
CCDC168Q8NDH2 AC116407.4-201ENST00000623319 1061 ntBASIC17.02■□□□□ 0.31
CCDC168Q8NDH2 AL121956.5-201ENST00000625261 221 ntBASIC17.02■□□□□ 0.31
CCDC168Q8NDH2 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC168Q8NDH2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC168Q8NDH2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC168Q8NDH2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC168Q8NDH2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC168Q8NDH2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC168Q8NDH2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CCDC168Q8NDH2 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC168Q8NDH2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms