Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RETREG2Q8NC44 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.94■■□□□ 1.26
RETREG2Q8NC44 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RETREG2Q8NC44 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RETREG2Q8NC44 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.93■■□□□ 1.26
RETREG2Q8NC44 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.93■■□□□ 1.26
RETREG2Q8NC44 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
RETREG2Q8NC44 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RETREG2Q8NC44 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC22.93■■□□□ 1.26
RETREG2Q8NC44 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.93■■□□□ 1.26
RETREG2Q8NC44 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RETREG2Q8NC44 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
RETREG2Q8NC44 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RETREG2Q8NC44 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.93■■□□□ 1.26
RETREG2Q8NC44 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RETREG2Q8NC44 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.93■■□□□ 1.26
RETREG2Q8NC44 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC22.93■■□□□ 1.26
RETREG2Q8NC44 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RETREG2Q8NC44 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.93■■□□□ 1.26
RETREG2Q8NC44 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
RETREG2Q8NC44 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC22.93■■□□□ 1.26
RETREG2Q8NC44 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
RETREG2Q8NC44 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.92■■□□□ 1.26
RETREG2Q8NC44 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
RETREG2Q8NC44 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RETREG2Q8NC44 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RETREG2Q8NC44 AC116050.2-201ENST00000612102 1779 ntBASIC22.92■■□□□ 1.26
RETREG2Q8NC44 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RETREG2Q8NC44 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RETREG2Q8NC44 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
RETREG2Q8NC44 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
RETREG2Q8NC44 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.92■■□□□ 1.26
RETREG2Q8NC44 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.92■■□□□ 1.26
RETREG2Q8NC44 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RETREG2Q8NC44 RPPH1-201ENST00000516869 333 ntBASIC22.92■■□□□ 1.26
RETREG2Q8NC44 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC22.92■■□□□ 1.26
RETREG2Q8NC44 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC22.92■■□□□ 1.26
RETREG2Q8NC44 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC22.92■■□□□ 1.26
RETREG2Q8NC44 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.92■■□□□ 1.26
RETREG2Q8NC44 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RETREG2Q8NC44 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
RETREG2Q8NC44 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.92■■□□□ 1.26
RETREG2Q8NC44 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
RETREG2Q8NC44 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.91■■□□□ 1.26
RETREG2Q8NC44 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.91■■□□□ 1.26
RETREG2Q8NC44 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RETREG2Q8NC44 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
RETREG2Q8NC44 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RETREG2Q8NC44 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
RETREG2Q8NC44 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RETREG2Q8NC44 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RETREG2Q8NC44 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
RETREG2Q8NC44 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
RETREG2Q8NC44 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC22.91■■□□□ 1.26
RETREG2Q8NC44 KRT18P68-201ENST00000392293 1000 ntBASIC22.91■■□□□ 1.26
RETREG2Q8NC44 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
RETREG2Q8NC44 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RETREG2Q8NC44 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.91■■□□□ 1.26
RETREG2Q8NC44 C1QBPP2-201ENST00000528754 825 ntBASIC22.91■■□□□ 1.26
RETREG2Q8NC44 PNMA6B-201ENST00000538162 1200 ntBASIC22.91■■□□□ 1.26
RETREG2Q8NC44 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.91■■□□□ 1.26
RETREG2Q8NC44 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.91■■□□□ 1.26
RETREG2Q8NC44 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RETREG2Q8NC44 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RETREG2Q8NC44 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.91■■□□□ 1.26
RETREG2Q8NC44 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.91■■□□□ 1.26
RETREG2Q8NC44 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RETREG2Q8NC44 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
RETREG2Q8NC44 AC092368.3-202ENST00000574180 1591 ntBASIC22.9■■□□□ 1.26
RETREG2Q8NC44 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
RETREG2Q8NC44 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
RETREG2Q8NC44 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.9■■□□□ 1.26
RETREG2Q8NC44 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
RETREG2Q8NC44 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.9■■□□□ 1.26
RETREG2Q8NC44 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC22.9■■□□□ 1.26
RETREG2Q8NC44 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RETREG2Q8NC44 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RETREG2Q8NC44 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.9■■□□□ 1.26
RETREG2Q8NC44 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.9■■□□□ 1.26
RETREG2Q8NC44 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.89■■□□□ 1.26
RETREG2Q8NC44 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RETREG2Q8NC44 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RETREG2Q8NC44 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RETREG2Q8NC44 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RETREG2Q8NC44 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.89■■□□□ 1.25
RETREG2Q8NC44 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RETREG2Q8NC44 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
RETREG2Q8NC44 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
RETREG2Q8NC44 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.89■■□□□ 1.25
RETREG2Q8NC44 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.89■■□□□ 1.25
RETREG2Q8NC44 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RETREG2Q8NC44 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
RETREG2Q8NC44 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC22.89■■□□□ 1.25
RETREG2Q8NC44 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
RETREG2Q8NC44 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RETREG2Q8NC44 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.89■■□□□ 1.25
RETREG2Q8NC44 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RETREG2Q8NC44 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
RETREG2Q8NC44 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
RETREG2Q8NC44 FEM1AP1-201ENST00000431297 1995 ntBASIC22.89■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms