Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC25.9■■□□□ 1.74
CCDC30Q5VVM6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CCDC30Q5VVM6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC25.9■■□□□ 1.74
CCDC30Q5VVM6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CCDC30Q5VVM6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CCDC30Q5VVM6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CCDC30Q5VVM6 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CCDC30Q5VVM6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CCDC30Q5VVM6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
CCDC30Q5VVM6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CCDC30Q5VVM6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
CCDC30Q5VVM6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CCDC30Q5VVM6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
CCDC30Q5VVM6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CCDC30Q5VVM6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CCDC30Q5VVM6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC25.89■■□□□ 1.74
CCDC30Q5VVM6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CCDC30Q5VVM6 SOX15-203ENST00000570788 1093 ntBASIC25.89■■□□□ 1.74
CCDC30Q5VVM6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC25.89■■□□□ 1.73
CCDC30Q5VVM6 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
CCDC30Q5VVM6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
CCDC30Q5VVM6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CCDC30Q5VVM6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
CCDC30Q5VVM6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC25.88■■□□□ 1.73
CCDC30Q5VVM6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC25.88■■□□□ 1.73
CCDC30Q5VVM6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CCDC30Q5VVM6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC25.88■■□□□ 1.73
CCDC30Q5VVM6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CCDC30Q5VVM6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC25.88■■□□□ 1.73
CCDC30Q5VVM6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
CCDC30Q5VVM6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CCDC30Q5VVM6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CCDC30Q5VVM6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC25.88■■□□□ 1.73
CCDC30Q5VVM6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC25.87■■□□□ 1.73
CCDC30Q5VVM6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC25.87■■□□□ 1.73
CCDC30Q5VVM6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC25.87■■□□□ 1.73
CCDC30Q5VVM6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
CCDC30Q5VVM6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
CCDC30Q5VVM6 AC023632.3-201ENST00000521633 145 ntBASIC25.87■■□□□ 1.73
CCDC30Q5VVM6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC25.87■■□□□ 1.73
CCDC30Q5VVM6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC25.87■■□□□ 1.73
CCDC30Q5VVM6 AC006058.3-201ENST00000606217 1069 ntBASIC25.87■■□□□ 1.73
CCDC30Q5VVM6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
CCDC30Q5VVM6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
CCDC30Q5VVM6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC30Q5VVM6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC25.86■■□□□ 1.73
CCDC30Q5VVM6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC30Q5VVM6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC30Q5VVM6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC30Q5VVM6 KRT18P29-201ENST00000397031 1267 ntBASIC25.86■■□□□ 1.73
CCDC30Q5VVM6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC30Q5VVM6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC30Q5VVM6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC30Q5VVM6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC25.86■■□□□ 1.73
CCDC30Q5VVM6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC30Q5VVM6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC25.86■■□□□ 1.73
CCDC30Q5VVM6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
CCDC30Q5VVM6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
CCDC30Q5VVM6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC25.86■■□□□ 1.73
CCDC30Q5VVM6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC30Q5VVM6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC25.85■■□□□ 1.73
CCDC30Q5VVM6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC30Q5VVM6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC30Q5VVM6 AL390719.1-204ENST00000412397 1219 ntBASIC25.85■■□□□ 1.73
CCDC30Q5VVM6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC30Q5VVM6 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC30Q5VVM6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC25.85■■□□□ 1.73
CCDC30Q5VVM6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC25.85■■□□□ 1.73
CCDC30Q5VVM6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC30Q5VVM6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC25.85■■□□□ 1.73
CCDC30Q5VVM6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC25.84■■□□□ 1.73
CCDC30Q5VVM6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC25.84■■□□□ 1.73
CCDC30Q5VVM6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC25.84■■□□□ 1.73
CCDC30Q5VVM6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC30Q5VVM6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC30Q5VVM6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC25.84■■□□□ 1.73
CCDC30Q5VVM6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC25.84■■□□□ 1.73
CCDC30Q5VVM6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC25.84■■□□□ 1.73
CCDC30Q5VVM6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC25.84■■□□□ 1.73
CCDC30Q5VVM6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC25.84■■□□□ 1.73
CCDC30Q5VVM6 AC006557.6-201ENST00000623071 864 ntBASIC25.84■■□□□ 1.73
CCDC30Q5VVM6 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC30Q5VVM6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
CCDC30Q5VVM6 PTBP1P-201ENST00000554374 1601 ntBASIC25.84■■□□□ 1.73
CCDC30Q5VVM6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC30Q5VVM6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC30Q5VVM6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
CCDC30Q5VVM6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC25.83■■□□□ 1.73
CCDC30Q5VVM6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CCDC30Q5VVM6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CCDC30Q5VVM6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CCDC30Q5VVM6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CCDC30Q5VVM6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CCDC30Q5VVM6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC25.83■■□□□ 1.73
CCDC30Q5VVM6 AC128676.1-201ENST00000454392 318 ntBASIC25.83■■□□□ 1.73
CCDC30Q5VVM6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC25.83■■□□□ 1.73
CCDC30Q5VVM6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC25.83■■□□□ 1.73
CCDC30Q5VVM6 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
CCDC30Q5VVM6 AC008687.6-201ENST00000596318 630 ntBASIC25.83■■□□□ 1.73
CCDC30Q5VVM6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC25.83■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms