Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.51■□□□□ 0.71
HMGCS1Q01581 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.51■□□□□ 0.71
HMGCS1Q01581 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.51■□□□□ 0.71
HMGCS1Q01581 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.51■□□□□ 0.71
HMGCS1Q01581 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCS1Q01581 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCS1Q01581 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.51■□□□□ 0.71
HMGCS1Q01581 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.51■□□□□ 0.71
HMGCS1Q01581 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCS1Q01581 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.51■□□□□ 0.71
HMGCS1Q01581 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
HMGCS1Q01581 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCS1Q01581 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCS1Q01581 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.51■□□□□ 0.71
HMGCS1Q01581 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCS1Q01581 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.51■□□□□ 0.71
HMGCS1Q01581 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCS1Q01581 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
HMGCS1Q01581 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCS1Q01581 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCS1Q01581 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
HMGCS1Q01581 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.5■□□□□ 0.71
HMGCS1Q01581 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCS1Q01581 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
HMGCS1Q01581 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCS1Q01581 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.5■□□□□ 0.71
HMGCS1Q01581 TERF1P5-201ENST00000477545 1207 ntBASIC19.5■□□□□ 0.71
HMGCS1Q01581 AL162430.1-201ENST00000480705 870 ntBASIC19.5■□□□□ 0.71
HMGCS1Q01581 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
HMGCS1Q01581 AC010536.3-201ENST00000620306 533 ntBASIC19.5■□□□□ 0.71
HMGCS1Q01581 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.5■□□□□ 0.71
HMGCS1Q01581 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCS1Q01581 TCF3P1-201ENST00000423021 1937 ntBASIC19.5■□□□□ 0.71
HMGCS1Q01581 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCS1Q01581 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
HMGCS1Q01581 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCS1Q01581 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCS1Q01581 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCS1Q01581 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCS1Q01581 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCS1Q01581 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCS1Q01581 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
HMGCS1Q01581 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCS1Q01581 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
HMGCS1Q01581 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
HMGCS1Q01581 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
HMGCS1Q01581 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.5■□□□□ 0.71
HMGCS1Q01581 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
HMGCS1Q01581 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCS1Q01581 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCS1Q01581 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCS1Q01581 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCS1Q01581 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCS1Q01581 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.49■□□□□ 0.71
HMGCS1Q01581 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCS1Q01581 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.49■□□□□ 0.71
HMGCS1Q01581 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCS1Q01581 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.49■□□□□ 0.71
HMGCS1Q01581 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
HMGCS1Q01581 FAM21FP-204ENST00000608637 956 ntBASIC19.49■□□□□ 0.71
HMGCS1Q01581 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCS1Q01581 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCS1Q01581 DPP3P2-201ENST00000416030 1696 ntBASIC19.49■□□□□ 0.71
HMGCS1Q01581 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCS1Q01581 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
HMGCS1Q01581 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCS1Q01581 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.48■□□□□ 0.71
HMGCS1Q01581 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGCS1Q01581 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HMGCS1Q01581 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGCS1Q01581 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HMGCS1Q01581 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGCS1Q01581 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HMGCS1Q01581 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.48■□□□□ 0.71
HMGCS1Q01581 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
HMGCS1Q01581 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.48■□□□□ 0.71
HMGCS1Q01581 KRT18P5-201ENST00000436075 1291 ntBASIC19.48■□□□□ 0.71
HMGCS1Q01581 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.48■□□□□ 0.71
HMGCS1Q01581 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.48■□□□□ 0.71
HMGCS1Q01581 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.48■□□□□ 0.71
HMGCS1Q01581 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.48■□□□□ 0.71
HMGCS1Q01581 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGCS1Q01581 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.48■□□□□ 0.71
HMGCS1Q01581 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.48■□□□□ 0.71
HMGCS1Q01581 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.48■□□□□ 0.71
HMGCS1Q01581 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
HMGCS1Q01581 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
HMGCS1Q01581 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HMGCS1Q01581 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HMGCS1Q01581 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMGCS1Q01581 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HMGCS1Q01581 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.47■□□□□ 0.71
HMGCS1Q01581 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMGCS1Q01581 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.47■□□□□ 0.71
HMGCS1Q01581 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMGCS1Q01581 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.47■□□□□ 0.71
HMGCS1Q01581 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.47■□□□□ 0.71
HMGCS1Q01581 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HMGCS1Q01581 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HMGCS1Q01581 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms