Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
HSPG2P98160 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC12.7□□□□□ -0.38
HSPG2P98160 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HSPG2P98160 KRT16P1-201ENST00000399124 1418 ntBASIC12.7□□□□□ -0.38
HSPG2P98160 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HSPG2P98160 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HSPG2P98160 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HSPG2P98160 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC12.7□□□□□ -0.38
HSPG2P98160 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
HSPG2P98160 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC12.7□□□□□ -0.38
HSPG2P98160 ABBA01031674.1-201ENST00000635145 728 ntBASIC12.7□□□□□ -0.38
HSPG2P98160 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HSPG2P98160 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC12.7□□□□□ -0.38
HSPG2P98160 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HSPG2P98160 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HSPG2P98160 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC12.69□□□□□ -0.38
HSPG2P98160 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
HSPG2P98160 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HSPG2P98160 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HSPG2P98160 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC12.69□□□□□ -0.38
HSPG2P98160 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HSPG2P98160 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HSPG2P98160 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC12.69□□□□□ -0.38
HSPG2P98160 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
HSPG2P98160 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HSPG2P98160 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HSPG2P98160 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
HSPG2P98160 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
HSPG2P98160 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.69□□□□□ -0.38
HSPG2P98160 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HSPG2P98160 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HSPG2P98160 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
HSPG2P98160 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
HSPG2P98160 AC139530.1-201ENST00000575312 1977 ntBASIC12.69□□□□□ -0.38
HSPG2P98160 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HSPG2P98160 TSPY21P-201ENST00000433481 731 ntBASIC12.69□□□□□ -0.38
HSPG2P98160 TSPY23P-201ENST00000440136 739 ntBASIC12.69□□□□□ -0.38
HSPG2P98160 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC12.69□□□□□ -0.38
HSPG2P98160 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
HSPG2P98160 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HSPG2P98160 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HSPG2P98160 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC12.69□□□□□ -0.38
HSPG2P98160 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HSPG2P98160 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HSPG2P98160 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.69□□□□□ -0.38
HSPG2P98160 AC026271.3-201ENST00000571884 352 ntBASIC12.69□□□□□ -0.38
HSPG2P98160 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HSPG2P98160 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HSPG2P98160 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HSPG2P98160 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HSPG2P98160 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HSPG2P98160 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC12.68□□□□□ -0.38
HSPG2P98160 GCA-201ENST00000233612 1694 ntTSL 2 BASIC12.68□□□□□ -0.38
HSPG2P98160 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC12.68□□□□□ -0.38
HSPG2P98160 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HSPG2P98160 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HSPG2P98160 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HSPG2P98160 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC12.68□□□□□ -0.38
HSPG2P98160 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC12.68□□□□□ -0.38
HSPG2P98160 AL691432.3-201ENST00000621860 400 ntBASIC12.68□□□□□ -0.38
HSPG2P98160 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
HSPG2P98160 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC12.68□□□□□ -0.38
HSPG2P98160 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC12.68□□□□□ -0.38
HSPG2P98160 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HSPG2P98160 AL845331.1-201ENST00000424978 1190 ntBASIC12.68□□□□□ -0.38
HSPG2P98160 YBX1P2-201ENST00000489612 999 ntBASIC12.68□□□□□ -0.38
HSPG2P98160 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC12.68□□□□□ -0.38
HSPG2P98160 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HSPG2P98160 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
HSPG2P98160 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC12.68□□□□□ -0.38
HSPG2P98160 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HSPG2P98160 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HSPG2P98160 AC128688.1-201ENST00000487626 519 ntBASIC12.68□□□□□ -0.38
HSPG2P98160 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC12.68□□□□□ -0.38
HSPG2P98160 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC12.68□□□□□ -0.38
HSPG2P98160 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
HSPG2P98160 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HSPG2P98160 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HSPG2P98160 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HSPG2P98160 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC12.68□□□□□ -0.38
HSPG2P98160 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
HSPG2P98160 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HSPG2P98160 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC12.67□□□□□ -0.38
HSPG2P98160 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HSPG2P98160 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HSPG2P98160 AP000593.1-201ENST00000393668 712 ntBASIC12.67□□□□□ -0.38
HSPG2P98160 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HSPG2P98160 FDX1P1-201ENST00000449115 551 ntBASIC12.67□□□□□ -0.38
HSPG2P98160 B3GAT3P1-201ENST00000471720 806 ntBASIC12.67□□□□□ -0.38
HSPG2P98160 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HSPG2P98160 AC116407.4-201ENST00000623319 1061 ntBASIC12.67□□□□□ -0.38
HSPG2P98160 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HSPG2P98160 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HSPG2P98160 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC12.67□□□□□ -0.38
HSPG2P98160 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HSPG2P98160 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HSPG2P98160 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HSPG2P98160 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC12.67□□□□□ -0.38
HSPG2P98160 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC12.67□□□□□ -0.38
HSPG2P98160 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms