Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PRAMEP78395 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
PRAMEP78395 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PRAMEP78395 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
PRAMEP78395 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PRAMEP78395 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PRAMEP78395 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.39■□□□□ 0.85
PRAMEP78395 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEP78395 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.39■□□□□ 0.85
PRAMEP78395 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEP78395 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEP78395 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.39■□□□□ 0.85
PRAMEP78395 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.39■□□□□ 0.85
PRAMEP78395 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.39■□□□□ 0.85
PRAMEP78395 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEP78395 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PRAMEP78395 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEP78395 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEP78395 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.39■□□□□ 0.85
PRAMEP78395 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.39■□□□□ 0.85
PRAMEP78395 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PRAMEP78395 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEP78395 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEP78395 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEP78395 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PRAMEP78395 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEP78395 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.38■□□□□ 0.85
PRAMEP78395 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.38■□□□□ 0.85
PRAMEP78395 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEP78395 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.38■□□□□ 0.85
PRAMEP78395 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
PRAMEP78395 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEP78395 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEP78395 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEP78395 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEP78395 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.38■□□□□ 0.85
PRAMEP78395 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEP78395 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEP78395 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEP78395 PGM5P4-201ENST00000421970 445 ntBASIC20.38■□□□□ 0.85
PRAMEP78395 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.38■□□□□ 0.85
PRAMEP78395 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.38■□□□□ 0.85
PRAMEP78395 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEP78395 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.38■□□□□ 0.85
PRAMEP78395 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEP78395 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEP78395 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEP78395 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PRAMEP78395 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEP78395 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEP78395 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PRAMEP78395 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEP78395 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEP78395 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.37■□□□□ 0.85
PRAMEP78395 AC016405.3-201ENST00000607710 860 ntBASIC20.37■□□□□ 0.85
PRAMEP78395 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PRAMEP78395 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
PRAMEP78395 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEP78395 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
PRAMEP78395 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PRAMEP78395 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.37■□□□□ 0.85
PRAMEP78395 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEP78395 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEP78395 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
PRAMEP78395 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.36■□□□□ 0.85
PRAMEP78395 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.36■□□□□ 0.85
PRAMEP78395 KRT8P36-201ENST00000489121 1440 ntBASIC20.36■□□□□ 0.85
PRAMEP78395 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEP78395 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEP78395 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.36■□□□□ 0.85
PRAMEP78395 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.36■□□□□ 0.85
PRAMEP78395 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PRAMEP78395 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEP78395 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEP78395 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.36■□□□□ 0.85
PRAMEP78395 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEP78395 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEP78395 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PRAMEP78395 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEP78395 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEP78395 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.36■□□□□ 0.85
PRAMEP78395 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEP78395 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.36■□□□□ 0.85
PRAMEP78395 CNN2P6-201ENST00000439038 900 ntBASIC20.36■□□□□ 0.85
PRAMEP78395 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.36■□□□□ 0.85
PRAMEP78395 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.36■□□□□ 0.85
PRAMEP78395 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.36■□□□□ 0.85
PRAMEP78395 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.36■□□□□ 0.85
PRAMEP78395 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.36■□□□□ 0.85
PRAMEP78395 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.36■□□□□ 0.85
PRAMEP78395 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEP78395 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.36■□□□□ 0.85
PRAMEP78395 AL512408.1-201ENST00000569378 2000 ntBASIC20.36■□□□□ 0.85
PRAMEP78395 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEP78395 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEP78395 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEP78395 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEP78395 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.35■□□□□ 0.85
PRAMEP78395 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.35■□□□□ 0.85
PRAMEP78395 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms