Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.61■□□□□ 0.89
ATXN3P54252 C1QBPP2-201ENST00000528754 825 ntBASIC20.61■□□□□ 0.89
ATXN3P54252 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.61■□□□□ 0.89
ATXN3P54252 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.61■□□□□ 0.89
ATXN3P54252 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATXN3P54252 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATXN3P54252 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATXN3P54252 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATXN3P54252 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN3P54252 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.6■□□□□ 0.89
ATXN3P54252 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.6■□□□□ 0.89
ATXN3P54252 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN3P54252 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN3P54252 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN3P54252 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN3P54252 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN3P54252 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN3P54252 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ATXN3P54252 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN3P54252 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.6■□□□□ 0.89
ATXN3P54252 CDV3P1-201ENST00000471403 739 ntBASIC20.6■□□□□ 0.89
ATXN3P54252 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.6■□□□□ 0.89
ATXN3P54252 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.6■□□□□ 0.89
ATXN3P54252 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.6■□□□□ 0.89
ATXN3P54252 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN3P54252 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN3P54252 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN3P54252 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN3P54252 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
ATXN3P54252 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.59■□□□□ 0.89
ATXN3P54252 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
ATXN3P54252 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATXN3P54252 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.59■□□□□ 0.89
ATXN3P54252 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ATXN3P54252 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATXN3P54252 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.59■□□□□ 0.89
ATXN3P54252 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
ATXN3P54252 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.59■□□□□ 0.89
ATXN3P54252 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.59■□□□□ 0.89
ATXN3P54252 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.59■□□□□ 0.89
ATXN3P54252 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.59■□□□□ 0.89
ATXN3P54252 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
ATXN3P54252 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATXN3P54252 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.59■□□□□ 0.89
ATXN3P54252 HLA-B-256ENST00000639848 1089 ntBASIC20.59■□□□□ 0.89
ATXN3P54252 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.59■□□□□ 0.89
ATXN3P54252 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.59■□□□□ 0.89
ATXN3P54252 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ATXN3P54252 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATXN3P54252 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATXN3P54252 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATXN3P54252 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
ATXN3P54252 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.59■□□□□ 0.89
ATXN3P54252 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ATXN3P54252 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
ATXN3P54252 KRT17P1-201ENST00000399211 1546 ntBASIC20.58■□□□□ 0.89
ATXN3P54252 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATXN3P54252 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATXN3P54252 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATXN3P54252 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATXN3P54252 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
ATXN3P54252 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
ATXN3P54252 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATXN3P54252 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
ATXN3P54252 AL355472.2-201ENST00000422958 438 ntBASIC20.58■□□□□ 0.89
ATXN3P54252 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.58■□□□□ 0.89
ATXN3P54252 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATXN3P54252 RPPH1-201ENST00000516869 333 ntBASIC20.58■□□□□ 0.89
ATXN3P54252 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.58■□□□□ 0.89
ATXN3P54252 AC073912.3-201ENST00000624414 853 ntBASIC20.58■□□□□ 0.89
ATXN3P54252 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.58■□□□□ 0.89
ATXN3P54252 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATXN3P54252 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ATXN3P54252 AC061975.6-201ENST00000579045 1553 ntBASIC20.58■□□□□ 0.88
ATXN3P54252 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATXN3P54252 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ATXN3P54252 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
ATXN3P54252 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATXN3P54252 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.57■□□□□ 0.88
ATXN3P54252 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.57■□□□□ 0.88
ATXN3P54252 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATXN3P54252 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATXN3P54252 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ATXN3P54252 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATXN3P54252 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATXN3P54252 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.57■□□□□ 0.88
ATXN3P54252 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
ATXN3P54252 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.57■□□□□ 0.88
ATXN3P54252 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.57■□□□□ 0.88
ATXN3P54252 MIR4497-201ENST00000583208 89 ntBASIC20.57■□□□□ 0.88
ATXN3P54252 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.57■□□□□ 0.88
ATXN3P54252 AL589743.5-201ENST00000616611 1050 ntBASIC20.57■□□□□ 0.88
ATXN3P54252 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATXN3P54252 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATXN3P54252 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.57■□□□□ 0.88
ATXN3P54252 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATXN3P54252 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATXN3P54252 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.56■□□□□ 0.88
ATXN3P54252 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATXN3P54252 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms