Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
FREM3P0C091 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
FREM3P0C091 AL121603.2-201ENST00000557373 2117 ntBASIC18.43■□□□□ 0.54
FREM3P0C091 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
FREM3P0C091 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
FREM3P0C091 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FREM3P0C091 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
FREM3P0C091 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
FREM3P0C091 CYP21A1P-202ENST00000354927 1481 ntBASIC18.43■□□□□ 0.54
FREM3P0C091 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.43■□□□□ 0.54
FREM3P0C091 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
FREM3P0C091 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FREM3P0C091 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FREM3P0C091 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FREM3P0C091 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FREM3P0C091 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FREM3P0C091 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
FREM3P0C091 LINC01006-201ENST00000333319 2292 ntBASIC18.42■□□□□ 0.54
FREM3P0C091 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
FREM3P0C091 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FREM3P0C091 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.42■□□□□ 0.54
FREM3P0C091 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.42■□□□□ 0.54
FREM3P0C091 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.42■□□□□ 0.54
FREM3P0C091 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FREM3P0C091 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FREM3P0C091 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FREM3P0C091 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
FREM3P0C091 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
FREM3P0C091 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FREM3P0C091 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FREM3P0C091 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FREM3P0C091 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
FREM3P0C091 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FREM3P0C091 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FREM3P0C091 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.41■□□□□ 0.54
FREM3P0C091 AC098590.1-201ENST00000468126 897 ntBASIC18.41■□□□□ 0.54
FREM3P0C091 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.41■□□□□ 0.54
FREM3P0C091 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FREM3P0C091 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
FREM3P0C091 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FREM3P0C091 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FREM3P0C091 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FREM3P0C091 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FREM3P0C091 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
FREM3P0C091 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
FREM3P0C091 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.41■□□□□ 0.54
FREM3P0C091 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FREM3P0C091 PLK5-205ENST00000642079 1969 ntBASIC18.41■□□□□ 0.54
FREM3P0C091 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
FREM3P0C091 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FREM3P0C091 AC092667.1-201ENST00000434301 2586 ntBASIC18.4■□□□□ 0.54
FREM3P0C091 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FREM3P0C091 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
FREM3P0C091 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FREM3P0C091 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FREM3P0C091 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FREM3P0C091 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FREM3P0C091 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.4■□□□□ 0.54
FREM3P0C091 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.4■□□□□ 0.54
FREM3P0C091 AC073314.1-201ENST00000568729 2216 ntBASIC18.4■□□□□ 0.54
FREM3P0C091 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FREM3P0C091 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.4■□□□□ 0.54
FREM3P0C091 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FREM3P0C091 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
FREM3P0C091 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.4■□□□□ 0.54
FREM3P0C091 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
FREM3P0C091 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FREM3P0C091 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FREM3P0C091 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
FREM3P0C091 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FREM3P0C091 POM121L13P-201ENST00000422362 380 ntBASIC18.4■□□□□ 0.54
FREM3P0C091 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
FREM3P0C091 RPS2P52-201ENST00000469610 820 ntBASIC18.4■□□□□ 0.54
FREM3P0C091 AC026366.1-201ENST00000488803 879 ntBASIC18.4■□□□□ 0.54
FREM3P0C091 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.4■□□□□ 0.54
FREM3P0C091 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.4■□□□□ 0.54
FREM3P0C091 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
FREM3P0C091 TMEM191A-211ENST00000637163 1067 ntBASIC18.4■□□□□ 0.54
FREM3P0C091 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.4■□□□□ 0.54
FREM3P0C091 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.4■□□□□ 0.54
FREM3P0C091 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
FREM3P0C091 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
FREM3P0C091 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
FREM3P0C091 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
FREM3P0C091 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
FREM3P0C091 AP005212.1-201ENST00000581547 1997 ntBASIC18.39■□□□□ 0.53
FREM3P0C091 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FREM3P0C091 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FREM3P0C091 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
FREM3P0C091 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
FREM3P0C091 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
FREM3P0C091 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FREM3P0C091 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FREM3P0C091 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FREM3P0C091 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.39■□□□□ 0.53
FREM3P0C091 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.39■□□□□ 0.53
FREM3P0C091 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
FREM3P0C091 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FREM3P0C091 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
FREM3P0C091 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms